Hi, I made 3 changes within a few days of each other and I don?t know which one caused this. I always installed new pacages (and updated existing packages) in the main library on my Mac, not in the library folder of my own account. But after putting a new hard drive in my Mac, updating R to 3.0.2 (from 3.0.1), updating my OS to Mavericks, I can no longer do so, I receive error messages telling me I?d have to use the command line if I insisted in doing it now. So I installed them in my own account. As I am the only R user on my Mac, it is not a great deal. But I am curious to know which of my 3 changes is to blame for the change. I forgot: my user account is an administrator account. Thanks, Denis Chabot
Can only install packages in my (user) library, even as administrator
2 messages · Denis Chabot, Steve Lianoglou
3 days later
Hi,
On Wed, Dec 4, 2013 at 8:44 PM, Denis Chabot <chabot.denis at gmail.com> wrote:
Hi, I made 3 changes within a few days of each other and I don?t know which one caused this. I always installed new pacages (and updated existing packages) in the main library on my Mac, not in the library folder of my own account. But after putting a new hard drive in my Mac, updating R to 3.0.2 (from 3.0.1), updating my OS to Mavericks, I can no longer do so, I receive error messages telling me I?d have to use the command line if I insisted in doing it now.
(1) Could you please copy/paste the exact error messages you are getting? Paraphrasing it isn't very helpful. (2) Can you copy paste the output of the following command from the terminal: $ ls -ld /Library/Frameworks/R.framework/Resources/library Mine looks like: drwxrwxr-x 56 root admin 1904 Nov 27 11:40 /Library/Frameworks/R.framework/Resources/library (The leading `$` above is just a delimiter to suggest I am typing at the terminal/bash prompt -- you don't type in `$`) (3) Please copy/paste the output of the following command from the terminal: $ groups YOUR_ACCOUNT Where YOUR_ACCOUNT is whatever your user account is (ie. the name of your home directory) For instance, my user account is `lianogls` (my home directory is /Users/lianogls), so I'd do: $ groups lianogls and the output is: lianogls domainus com.apple.access_screensharing everyone _appstore netaccounts _appserverusr admin _appserveradm _lpadmin _lpoperator _developer Thanks, -steve
Steve Lianoglou Computational Biologist Genentech