Vince,
I'm pretty sure you are using custom settings, because the binary uses
clang:
$ R CMD config CC
clang
$ grep -r /opt/local/bin/ /Library/Frameworks/R.framework/
$
We don't have /opt/local on the build machine so it must be something
configured in your system.
Please make sure you don't use custom package managers on you PATH since
you'd be picking up non-CRAN R.
Cheers,
Simon
On Nov 21, 2017, at 8:26 AM, Vincent Carey <stvjc at channing.harvard.edu>
On Tue, Nov 21, 2017 at 3:34 AM, Prof Brian Ripley <
ripley at stats.ox.ac.uk>
On 21/11/2017 04:03, Vincent Carey wrote:
%vjcair> R CMD config CC
/opt/local/bin/gcc-mp-5
I don't seem to be able to override this using environment variable CC.
And
Yes, section 6.3.3. gives the solution.
I cannot see how to install gcc-mp-5. This version of R was obtained
r.research.att.com, R-3.4-branch-el-capitan.pkg.
I would have expected clang to be the c compiler for this build. I
It was for the released version of 3.4.2. Problems with off-CRAN builds
are best addressed to the builder, here Simon Urbanek. But that is a
month-old snapshot build ... I don't understand why you did not simply
update it, and I see 'clang' in the current snapshot.
Without alternate settings in the platform-specific Makevars, the most
recent binary gives the value of "R CMD config CC" noted in the original
posting.
Thank you for your assistance.
appreciate any suggestions. As it stands, any installation from source
requiring
compilation throws errors like
/bin/sh: /opt/local/bin/g++-mp-5: No such file or directory
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