(Why do we get an identical post 2 weeks later??) I see slightly different trouble:
library(rgl)
Error : .onLoad failed in loadNamespace() for 'rgl', details: call: dyn.load(file, DLLpath = DLLpath, ...) error: unable to load shared object '/Library/Frameworks/R.framework/Versions/2.15/Resources/library/rgl/libs/x86_64/aglrgl.so': dlopen(/Library/Frameworks/R.framework/Versions/2.15/Resources/library/rgl/libs/x86_64/aglrgl.so, 6): Symbol not found: __ZN3gui13OSXGUIFactory12hasEventLoopEv Referenced from: /Library/Frameworks/R.framework/Versions/2.15/Resources/library/rgl/libs/x86_64/aglrgl.so Expected in: dynamic lookup Error: package/namespace load failed for ?rgl? ------------- The odd thing is, it happens only in R.app 64 bit, not in 32 bit and not in R64 in Terminal.app. Same pattern was present in 2.15.0.
On Jun 29, 2012, at 18:39 , Michael Kubovy wrote:
sessionInfo()
R version 2.15.1 (2012-06-22) Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit) locale: [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 attached base packages: [1] datasets splines utils stats graphics grDevices methods base other attached packages: [1] DiceEval_1.1 DiceKriging_1.3.3 BiocInstaller_1.4.7 ctv_0.7-4 sos_1.3-4 brew_1.0-6 Hmisc_3.9-3 survival_2.36-14 [9] MASS_7.3-19 loaded via a namespace (and not attached): [1] cluster_1.14.2 grid_2.15.1 lattice_0.20-6 tools_2.15.1 ############## FROM BINARY #############
install.packages('rgl')
trying URL 'http://lib.stat.cmu.edu/R/CRAN/bin/macosx/leopard/contrib/2.15/rgl_0.92.880.tgz' Content type 'application/x-gzip' length 10757858 bytes (10.3 Mb) opened URL ================================================== downloaded 10.3 Mb The downloaded binary packages are in /var/folders/gm/j372x16n747504v9j8nvwryr0000gn/T//RtmpxtW0O1/downloaded_packages
library(rgl)
Error in get(Info[i, 1], envir = env) : internal error -3 in R_decompress1 Error: package/namespace load failed for ?rgl? ############## FROM SOURCE #############
install.packages('rgl', type = 'source' )
trying URL 'http://lib.stat.cmu.edu/R/CRAN/src/contrib/rgl_0.92.880.tar.gz' Content type 'application/x-gzip' length 1742168 bytes (1.7 Mb) opened URL ================================================== downloaded 1.7 Mb ######### ... ############## * installing *source* package ?rgl? ... ** package ?rgl? successfully unpacked and MD5 sums checked checking for gcc... gcc -arch x86_64 -std=gnu99 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc -arch x86_64 -std=gnu99 accepts -g... yes checking for gcc -arch x86_64 -std=gnu99 option to accept ISO C89... none needed checking how to run the C preprocessor... gcc -arch x86_64 -std=gnu99 -E checking for gcc... (cached) gcc -arch x86_64 -std=gnu99 checking whether we are using the GNU C compiler... (cached) yes checking whether gcc -arch x86_64 -std=gnu99 accepts -g... (cached) yes checking for gcc -arch x86_64 -std=gnu99 option to accept ISO C89... (cached) none needed checking for libpng-config... yes configure: using libpng-config configure: using libpng dynamic linkage checking for X... libraries /usr/X11/lib, headers checking for glEnd in -lGL... yes checking for gluProject in -lGLU... yes checking for freetype-config... yes configure: using Freetype and FTGL configure: creating ./config.status config.status: creating src/Makevars ** libs *** arch - x86_64 g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c ABCLineSet.cpp -o ABCLineSet.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c BBoxDeco.cpp -o BBoxDeco.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c Background.cpp -o Background.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c Color.cpp -o Color.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c Disposable.cpp -o Disposable.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c Light.cpp -o Light.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c LineSet.cpp -o LineSet.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c LineStripSet.cpp -o LineStripSet.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c Material.cpp -o Material.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c PlaneSet.cpp -o PlaneSet.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c PointSet.cpp -o PointSet.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c PrimitiveSet.cpp -o PrimitiveSet.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c QuadSet.cpp -o QuadSet.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c RenderContext.cpp -o RenderContext.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c Shape.cpp -o Shape.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c SphereMesh.cpp -o SphereMesh.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c SphereSet.cpp -o SphereSet.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c SpriteSet.cpp -o SpriteSet.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c String.cpp -o String.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c Surface.cpp -o Surface.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c TextSet.cpp -o TextSet.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c Texture.cpp -o Texture.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c Viewpoint.cpp -o Viewpoint.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c api.cpp -o api.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c assert.cpp -o assert.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c callbacks.cpp -o callbacks.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c device.cpp -o device.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c devicemanager.cpp -o devicemanager.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c fps.cpp -o fps.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c ftgl.cpp -o ftgl.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c geom.cpp -o geom.o gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -fPIC -g -O2 -c gl2ps.c -o gl2ps.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c glErrors.cpp -o glErrors.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c glgui.cpp -o glgui.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c gui.cpp -o gui.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c init.cpp -o init.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c par3d.cpp -o par3d.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c pixmap.cpp -o pixmap.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c render.cpp -o render.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c rglmath.cpp -o rglmath.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c rglview.cpp -o rglview.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c scene.cpp -o scene.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c select.cpp -o select.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c win32gui.cpp -o win32gui.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c win32lib.cpp -o win32lib.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c x11gui.cpp -o x11gui.o x11gui.cpp: In constructor ?gui::X11GUIFactory::X11GUIFactory(const char*)?: x11gui.cpp:468: warning: deprecated conversion from string constant to ?char*? g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/System/Library/Frameworks/OpenGL.framework/Headers -DHAVE_PNG_H -I/usr/local/include/libpng14 -DDarwin -DNO_GL_PREFIX -I/usr/X11R6/include -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c x11lib.cpp -o x11lib.o g++ -arch x86_64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o rgl.so ABCLineSet.o BBoxDeco.o Background.o Color.o Disposable.o Light.o LineSet.o LineStripSet.o Material.o PlaneSet.o PointSet.o PrimitiveSet.o QuadSet.o RenderContext.o Shape.o SphereMesh.o SphereSet.o SpriteSet.o String.o Surface.o TextSet.o Texture.o Viewpoint.o api.o assert.o callbacks.o device.o devicemanager.o fps.o ftgl.o geom.o gl2ps.o glErrors.o glgui.o gui.o init.o par3d.o pixmap.o render.o rglmath.o rglview.o scene.o select.o win32gui.o win32lib.o x11gui.o x11lib.o -lGLU -lGL -framework OpenGL -dylib_file /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib:/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib -L/usr/local/lib -lpng14 -L/usr/X11/lib -lX11 -L/usr/local/lib -lfreetype -lz -lbz2 -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation mkdir Temp mv x11*.o Temp mkdir -p AGL mv AGL/* . MAKINGAGL=TRUE /Library/Frameworks/R.framework/Resources/bin/R CMD SHLIB -o aglrgl.so *.cpp *.c \ osx/*.mm osx/*.cpp g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -DHAVE_PNG_H -I/usr/local/include/libpng14 -DRGL_USE_COCOA -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c x11gui.cpp -o x11gui.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -DHAVE_PNG_H -I/usr/local/include/libpng14 -DRGL_USE_COCOA -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c x11lib.cpp -o x11lib.o g++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -DHAVE_PNG_H -I/usr/local/include/libpng14 -DRGL_USE_COCOA -DHAVE_FREETYPE -Iext/ftgl -I/usr/local/include/freetype2 -I/usr/local/include -Iext -I/usr/local/include -g -O2 -fPIC -g -O2 -c osx/osxlib.cpp -o osx/osxlib.o g++ -arch x86_64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o aglrgl.so ABCLineSet.o BBoxDeco.o Background.o Color.o Disposable.o Light.o LineSet.o LineStripSet.o Material.o PlaneSet.o PointSet.o PrimitiveSet.o QuadSet.o RenderContext.o Shape.o SphereMesh.o SphereSet.o SpriteSet.o String.o Surface.o TextSet.o Texture.o Viewpoint.o api.o assert.o callbacks.o device.o devicemanager.o fps.o ftgl.o geom.o glErrors.o glgui.o gui.o init.o par3d.o pixmap.o render.o rglmath.o rglview.o scene.o select.o win32gui.o win32lib.o x11gui.o x11lib.o gl2ps.o osx/osxgui.o osx/osxlib.o -L/usr/local/lib -lpng14 -framework Cocoa -L/usr/local/lib -lfreetype -lz -lbz2 -lobjc -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation ld: warning: ignoring file osx/osxgui.o, file was built for i386 which is not the architecture being linked (x86_64) mv x11*.o AGL mv Temp/* . rm -rf Temp installing to /Library/Frameworks/R.framework/Versions/2.15/Resources/library/rgl/libs/x86_64 ** R ** demo ** inst ** preparing package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded ######### ... ############## * DONE (rgl) The downloaded source packages are in ?/private/var/folders/gm/j372x16n747504v9j8nvwryr0000gn/T/RtmpxtW0O1/downloaded_packages?
library(rgl)
Error in get(Info[i, 1], envir = env) : internal error -3 in R_decompress1 Error: package/namespace load failed for ?rgl?
______________________________________________ Professor Michael Kubovy University of Virginia Department of Psychology for mail add: for FedEx or UPS add: P.O.Box 400400 Gilmer Hall, Room 102 Charlottesville, VA 22904-4400 485 McCormick Road USA Charlottesville, VA 22903 room phone Office: B011 +1-434-982-4729 Lab: B019 +1-434-982-4751 WWW: http://www.people.virginia.edu/~mk9y/ [[alternative HTML version deleted]] _______________________________________________ R-SIG-Mac mailing list R-SIG-Mac at r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac
Peter Dalgaard, Professor Center for Statistics, Copenhagen Business School Solbjerg Plads 3, 2000 Frederiksberg, Denmark Phone: (+45)38153501 Email: pd.mes at cbs.dk Priv: PDalgd at gmail.com