[R-meta] forest plot using metafor: how to add CIs as line segments

Wed, Aug 16, 2017 3:26 PM

Hi Sophia,

I am not 100% sure if I understand what you want, but try:

forest(..., efac=c(1,0))

and

addpoly(..., efac=0)

and see if this is what you want.

By the way, you do not have to use forest.rma() -- using forest() is sufficient.

Best,
Wolfgang

Wolfgang Viechtbauer, Ph.D., Statistician | Department of Psychiatry and    
Neuropsychology | Maastricht University | P.O. Box 616 (VIJV1) | 6200 MD    
Maastricht, The Netherlands | +31 (43) 388-4170 | http://www.wvbauer.com    

-----Original Message-----
From: R-sig-meta-analysis [mailto:r-sig-meta-analysis-bounces at r-project.org] On Behalf Of Sophia Kyriakou
Sent: Wednesday, August 16, 2017 22:51
To: r-sig-meta-analysis at r-project.org
Subject: [R-meta] forest plot using metafor: how to add CIs as line segments

Hello,

At the moment I have a forest plot obtained using the following code chunk.

data <- data.frame(y = c(-1.90, 1.00, -3.50, -5.90, -4.00),
sigma2 = c(0.34, 0.84, 1.37, 1.37, 0.28),
author = c("Study 1","Study 2","Study 3","Study 4","Study 5"))
estim <- data.frame(pred = c(-2.80,-2.80),LRlow = c(-4.78,-5.26),LRup =
c(-0.82,-0.40))

library(metafor)
res <- rma(y, sigma2, data=data, method = "ML")
forest.rma(res, xlim=c(-23, 15), at=seq(-10,4,2), slab=data$author,
ylim=c(-3, 8), xlab="Change in DBP", mlab="")
text(par("usr")[2], 7, pos=2, "DBP Change, [95% CI]", font=2)
text(par("usr")[1], -1, pos=4, "ML")
addpoly(estim$pred, ci.lb=estim$LRlow, ci.ub=estim$LRup, rows=-2,
mlab=c("DL", "DR"))

I would like to change the diamonds that  represent confidence intervals
into horizontal line segments, indicating the lower and upper limits of the
confidence interval. I am not interested in showing the estimated overall
effect of the model.
Is that possible?

Thanks in advance.

[R-meta] forest plot using metafor: how to add CIs as line segments

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