[R-meta] modifying the default forest plot
Am 05.12.17 um 09:58 schrieb Gerta Ruecker:
Hi, What about using the R package meta that has the most flexible forest function? You can specify all sorts of things, such as ordering, labels, title, x-axis label, marker type, fonts, colours, whether the weights should be plotted, and so on. See https://cran.r-project.org/web/packages/meta/index.html .
Just to give some examples. The forest plots in the attached PDF-file
were generated using the following R commands:
library(meta)
set.seed(666)
##
mean <- 1:5
se.mean <- mean / 10
author <- sample(LETTERS, 5)
year <- 2005 + sample(-10:10, 5)
m1 <- metagen(mean, se.mean, sm = "MD",
????????????? studlab = paste(author, year))
pdf("forest18.pdf", width = 9.75, height = 4)
##
forest(m1)
forest(m1, sortvar = -TE)
forest(m1, sortvar = year)
forest(m1, xlab = "Estimated Effect Size")
forest(m1, test.overall = TRUE, colgap.forest.left = "2cm")
forest(m1, layout = "JAMA")
forest(m1, layout = "RevMan5")
##
dev.off()
You can use the arguments 'leftcols' and 'rightcols' to add / remove
columns from the left and right side of the forest plot.
Best wishes,
Guido
Dr. Guido Schwarzer (sc at imbi.uni-freiburg.de) Institute of Medical Biometry and Statistics Stefan-Meier-Str. 26, D-79104 Freiburg | Phone: +49 (0)761 203 6668 http://www.imbi.uni-freiburg.de | Fax: +49 (0)761 203 6680 -------------- next part -------------- A non-text attachment was scrubbed... Name: forest18.pdf Type: application/pdf Size: 14973 bytes Desc: not available URL: <https://stat.ethz.ch/pipermail/r-sig-meta-analysis/attachments/20171205/143d33ae/attachment-0001.pdf>