[R-meta] Question on funnel plot interpretation
Dear Gabriel My interpretation looking at your plots is that you have a very strange set of primary studies. If the x-axis is really the z transformation of r then some of the r are .999 and some 0.001 which seems worthy of investigation before looking further. Michael
On 05/07/2023 09:14, Gabriel Cotlier via R-sig-meta-analysis wrote:
Hello all, I have produced?a funnel plot on the basis of an rma.mv <http://rma.mv>()?objectapplied to all the data set together ( not subsetting? using moderators ) as follows: image.png When looking at the figure I tried to think that maybe one of the following two interpretations could be the correct?one: a. ?There is a kind of random scattering of the effect sizes, therefore no symmetry is found and thus publication bised is observed. b. ?Given the randomness of the effect sizes distribution?covering the plot's space?unevenly?there is not a clear pattern that can indicate publication bias is observed. Is any of this interpretation?the correct one? Thanks a lot. Kind?regards, Gabriel #### CODE. ###### funnel_all <- rma.mv <http://rma.mv>(yi, ? ? ? ? ? ? ? ? ? ? ?vi, ? ? ? ? ? ? ? ? ? ? ?random = ~ 1 | Article / Sample_ID, ? ? ? ? ? ? ? ? ? ? ?data=dat) png(file = "funnel.png", ? ? width = 250, ? ? height = 200, ? ? res = 600, ? ? units = "mm") # par(mfrow = c(2, 1)) # full data f1 <- funnel(funnel_all, ? ? ? ? ? ? ?yaxis = "seinv", ? ? ? ? ? ? ?level = c(90, 95, 99), ? ? ? ? ? ? ?ylim = c(1, 20), ? ? ? ? ? ? ?shade = c("white", "gray55", "gray75"), ? ? ? ? ? ? ?refline = 0, ? ? ? ? ? ? ?legend = TRUE) mtext("A", side = 3, line = 0, adj = -0.13, cex = 2) dev.off() <http://www.avg.com/email-signature?utm_medium=email&utm_source=link&utm_campaign=sig-email&utm_content=emailclient> Virus-free.www.avg.com <http://www.avg.com/email-signature?utm_medium=email&utm_source=link&utm_campaign=sig-email&utm_content=emailclient> <#DAB4FAD8-2DD7-40BB-A1B8-4E2AA1F9FDF2>
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