-----Original Message-----
From: R-sig-meta-analysis [mailto:r-sig-meta-analysis-bounces at r-project.org]
On Behalf Of Divya Ravichandar
Sent: Monday, 08 June, 2020 22:01
To: r-sig-meta-analysis at r-project.org
Subject: Re: [R-meta] How does rma handle effect size of zero
Hi all
Apologies for a second email but I wanted to clarify the code provided in
the example above. Corrected code below
library(metafor)
library(magrittr)
case1 <- data.frame(Study= c("a","b","c","d"),ES=rep(.1,4),SE=rep(1e-5,4))
%>% rma(ES, SE^2, data=.) #non zero case
case2 <- data.frame(Study= c("a","b","c","d"),ES=rep(0,4),SE=rep(1e-5,4))
%>% rma(ES, SE^2, data=.) #zero case
On Mon, Jun 8, 2020 at 12:59 PM Divya Ravichandar <divya at secondgenome.com>
wrote:
Hi all
I would like to get some understanding around how rma handles effect sizes
of 0. A test example is outlined below
library(metafor)
library(magrittr)
case1 <- data.frame(Study= c("a","b","c","d"),ES=rep(.1,4),SE=rep(1e-5,4))
%>% rma(ES, SE^2, data=.) #non zero case
meta_case1 <- rma(ES, SE^2, data=case1)
case2 <- data.frame(Study= c("a","b","c","d"),ES=rep(0,4),SE=rep(1e-5,4))
%>% rma(ES, SE^2, data=.) #zero case
While case 1 results in a significant p value (<.0001), case 2 results in
a non-significant p value (1). Does a zero effect size violate any
assumptions and if not I wonder why a consistent estimate of 0 across
datasets results in a non-significant result?
Thanks
--
*Divya Ravichandar*
Scientist
Second Genome