Rma.mv model: m.overall <- rma.mv(HEDGE_G, HEDGE_VAR, random = list(~ 1 | EFFECT_ID, ~ 1 | COHORT_ID), intercept=TRUE, data=dataset, method = "REML", slab=paste(dataset$EFFECT_ID)) Funnel plot: funnel(m.overall,xlab = "Hedges' g", label="out") I am receiving the following list of warning messages: 1: In plot.window(...) : "label" is not a graphical parameter 2: In plot.xy(xy, type, ...) : "label" is not a graphical parameter 3: In axis(side = side, at = at, labels = labels, ...) : "label" is not a graphical parameter 4: In axis(side = side, at = at, labels = labels, ...) : "label" is not a graphical parameter 5: In box(...) : "label" is not a graphical parameter 6: In title(...) : "label" is not a graphical parameter 7: In rect(par.usr[1], par.usr[3], par.usr[2], par.usr[4], ... : "label" is not a graphical parameter 8: In axis(side = 2, at = seq(from = ylim[1], to = ylim[2], ... : "label" is not a graphical parameter 9: In int_abline(a = a, b = b, h = h, v = v, untf = untf, ... : "label" is not a graphical parameter 10: In polygon(c(ci.left, ci.right[ci.res:1]), c(yi.vals, ... : "label" is not a graphical parameter 11: In plot.xy(xy.coords(x, y), type = type, ...) : "label" is not a graphical parameter 12: In plot.xy(xy.coords(x, y), type = type, ...) : "label" is not a graphical parameter 13: In segments(refline, ylim[1], refline, ylim[2], ...) : "label" is not a graphical parameter 14: In plot.xy(xy.coords(x, y), type = type, ...) : "label" is not a graphical parameter 15: In axis(side = 1, at = at, labels = at.lab, ...) : "label" is not a graphical parameter Any suggestions for how to proceed? Dylan Johnson, MSc MA Student, School and Clinical Child Psychology Department of Applied Psychology and Human Development University of Toronto 252 Bloor Street West Toronto, ON M5S 1V6
[R-meta] Issue with adding labels to funnel plot in metafor
3 messages · Dylan Johnson, Wolfgang Viechtbauer
Dear Dylan, Install the 'devel' version: https://wviechtb.github.io/metafor/#installation Best, Wolfgang
-----Original Message----- From: R-sig-meta-analysis [mailto:r-sig-meta-analysis-bounces at r-project.org] On Behalf Of Dylan Johnson Sent: Tuesday, 15 December, 2020 22:54 To: r-sig-meta-analysis at r-project.org Subject: [R-meta] Issue with adding labels to funnel plot in metafor Rma.mv model: m.overall <- rma.mv(HEDGE_G, HEDGE_VAR, random = list(~ 1 | EFFECT_ID, ~ 1 | COHORT_ID), intercept=TRUE, data=dataset, method = "REML", slab=paste(dataset$EFFECT_ID)) Funnel plot: funnel(m.overall,xlab = "Hedges' g", label="out") I am receiving the following list of warning messages: 1: In plot.window(...) : "label" is not a graphical parameter 2: In plot.xy(xy, type, ...) : "label" is not a graphical parameter 3: In axis(side = side, at = at, labels = labels, ...) : "label" is not a graphical parameter 4: In axis(side = side, at = at, labels = labels, ...) : "label" is not a graphical parameter 5: In box(...) : "label" is not a graphical parameter 6: In title(...) : "label" is not a graphical parameter 7: In rect(par.usr[1], par.usr[3], par.usr[2], par.usr[4], ... : "label" is not a graphical parameter 8: In axis(side = 2, at = seq(from = ylim[1], to = ylim[2], ... : "label" is not a graphical parameter 9: In int_abline(a = a, b = b, h = h, v = v, untf = untf, ... : "label" is not a graphical parameter 10: In polygon(c(ci.left, ci.right[ci.res:1]), c(yi.vals, ... : "label" is not a graphical parameter 11: In plot.xy(xy.coords(x, y), type = type, ...) : "label" is not a graphical parameter 12: In plot.xy(xy.coords(x, y), type = type, ...) : "label" is not a graphical parameter 13: In segments(refline, ylim[1], refline, ylim[2], ...) : "label" is not a graphical parameter 14: In plot.xy(xy.coords(x, y), type = type, ...) : "label" is not a graphical parameter 15: In axis(side = 1, at = at, labels = at.lab, ...) : "label" is not a graphical parameter Any suggestions for how to proceed? Dylan Johnson, MSc MA Student, School and Clinical Child Psychology Department of Applied Psychology and Human Development University of Toronto 252 Bloor Street West Toronto, ON M5S 1V6
Thanks Wolfgang! Dylan Johnson, MSc MA Student, School and Clinical Child Psychology Department of Applied Psychology and Human Development University of Toronto 252 Bloor Street West Toronto, ON M5S 1V6 From: Viechtbauer, Wolfgang (SP)<mailto:wolfgang.viechtbauer at maastrichtuniversity.nl> Sent: December 15, 2020 5:18 PM To: Dylan Johnson<mailto:dylanr.johnson at mail.utoronto.ca>; r-sig-meta-analysis at r-project.org<mailto:r-sig-meta-analysis at r-project.org> Subject: RE: Issue with adding labels to funnel plot in metafor EXTERNAL EMAIL: Dear Dylan, Install the 'devel' version: https://wviechtb.github.io/metafor/#installation Best, Wolfgang
-----Original Message----- From: R-sig-meta-analysis [mailto:r-sig-meta-analysis-bounces at r-project.org] On Behalf Of Dylan Johnson Sent: Tuesday, 15 December, 2020 22:54 To: r-sig-meta-analysis at r-project.org Subject: [R-meta] Issue with adding labels to funnel plot in metafor Rma.mv model: m.overall <- rma.mv(HEDGE_G, HEDGE_VAR, random = list(~ 1 | EFFECT_ID, ~ 1 | COHORT_ID), intercept=TRUE, data=dataset, method = "REML", slab=paste(dataset$EFFECT_ID)) Funnel plot: funnel(m.overall,xlab = "Hedges' g", label="out") I am receiving the following list of warning messages: 1: In plot.window(...) : "label" is not a graphical parameter 2: In plot.xy(xy, type, ...) : "label" is not a graphical parameter 3: In axis(side = side, at = at, labels = labels, ...) : "label" is not a graphical parameter 4: In axis(side = side, at = at, labels = labels, ...) : "label" is not a graphical parameter 5: In box(...) : "label" is not a graphical parameter 6: In title(...) : "label" is not a graphical parameter 7: In rect(par.usr[1], par.usr[3], par.usr[2], par.usr[4], ... : "label" is not a graphical parameter 8: In axis(side = 2, at = seq(from = ylim[1], to = ylim[2], ... : "label" is not a graphical parameter 9: In int_abline(a = a, b = b, h = h, v = v, untf = untf, ... : "label" is not a graphical parameter 10: In polygon(c(ci.left, ci.right[ci.res:1]), c(yi.vals, ... : "label" is not a graphical parameter 11: In plot.xy(xy.coords(x, y), type = type, ...) : "label" is not a graphical parameter 12: In plot.xy(xy.coords(x, y), type = type, ...) : "label" is not a graphical parameter 13: In segments(refline, ylim[1], refline, ylim[2], ...) : "label" is not a graphical parameter 14: In plot.xy(xy.coords(x, y), type = type, ...) : "label" is not a graphical parameter 15: In axis(side = 1, at = at, labels = at.lab, ...) : "label" is not a graphical parameter Any suggestions for how to proceed? Dylan Johnson, MSc MA Student, School and Clinical Child Psychology Department of Applied Psychology and Human Development University of Toronto 252 Bloor Street West Toronto, ON M5S 1V6