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R-SIG-mixed-models November 2010

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Another MCMCglmm question - fixing correlations
2 msgs
Szymek Drobniak Another MCMCglmm question - fixing correlations Nov 30, 2010
Chaudhari, Monica Error in asMethod(object) : matrix is not symmetric [1, 2] Nov 30, 2010
Modeling for a zero-inflated continuous response
1 msg
Erin Latham Modeling for a zero-inflated continuous response Nov 30, 2010
Repeated measure comparisons: should the identity be a random or a fixed variable?
3 msgs
Billy Repeated measure comparisons: should the identity be a random or a fixed variable? Nov 26, 2010
Jarrod Hadfield Repeated measure comparisons: should the identity be a random or a fixed variable? Nov 27, 2010
Billy Repeated measure comparisons: should the identity be a random or a fixed variable? Nov 30, 2010
Random effects variance estimates lme vs lmer
1 msg
Beth Holbrook Random effects variance estimates lme vs lmer Nov 30, 2010
Some questions about lme4 package
1 msg
HPDinterval, lmer and strange intervals
1 msg
Niccolò Bassani HPDinterval, lmer and strange intervals Nov 30, 2010
LMER problem when all observations in one level are zero?
5 msgs
Sarah Reilly LMER problem when all observations in one level are zero? Nov 28, 2010
ONKELINX, Thierry LMER problem when all observations in one level are zero? Nov 29, 2010
John Maindonald LMER problem when all observations in one level are zero? Nov 29, 2010
Ben Bolker LMER problem when all observations in one level are zero? Nov 29, 2010
Dennis Murphy LMER problem when all observations in one level are zero? Nov 29, 2010
problem using geeglm: R keeps crashing
5 msgs
Chris Howden problem using geeglm: R keeps crashing Nov 28, 2010
Ben Bolker problem using geeglm: R keeps crashing Nov 28, 2010
Chris Howden problem using geeglm: R keeps crashing Nov 28, 2010
Ben Bolker problem using geeglm: R keeps crashing Nov 29, 2010
Chris Howden problem using geeglm: R keeps crashing Nov 29, 2010
Mixed models in lmer with no fixed effects
1 msg
Bruno Trevizan Pinotti Mixed models in lmer with no fixed effects Nov 29, 2010
multicolinearity?
4 msgs
Lucas Kid multicolinearity? Nov 29, 2010
ONKELINX, Thierry multicolinearity? Nov 29, 2010
Lucas Kid multicolinearity? Nov 29, 2010
Douglas Bates multicolinearity? Nov 29, 2010
Non normal random effects
12 msgs
Eric Edeline Non normal random effects Nov 26, 2010
John Maindonald Non normal random effects Nov 26, 2010
Eric Edeline Non normal random effects Nov 27, 2010
Valerio Bartolino Non normal random effects Nov 27, 2010
Douglas Bates Non normal random effects Nov 27, 2010
valerio.bartolino Non normal random effects Nov 27, 2010
Eric Edeline Non normal random effects Nov 27, 2010
John Maindonald Non normal random effects Nov 27, 2010
John Maindonald Non normal random effects Nov 27, 2010
Eric Edeline Non normal random effects Nov 28, 2010
Gustavo Betini Non normal random effects Nov 29, 2010
Douglas Bates Non normal random effects Nov 29, 2010
MCMCglmm question
1 msg
Szymek Drobniak MCMCglmm question Nov 28, 2010
large data set implies rejection of null?
4 msgs
Daniel Ezra Johnson large data set implies rejection of null? Nov 27, 2010
Jonathan Baron large data set implies rejection of null? Nov 27, 2010
Fredrik Nilsson large data set implies rejection of null? Nov 27, 2010
Fredrik Nilsson large data set implies rejection of null? Nov 28, 2010
Spatially correlated random effects
2 msgs
Elijah DePalma Spatially correlated random effects Nov 23, 2010
Shige Song Spatially correlated random effects Nov 27, 2010
comparison between glmm.admb and lme4
2 msgs
Brian Burke comparison between glmm.admb and lme4 Nov 26, 2010
Jarrod Hadfield comparison between glmm.admb and lme4 Nov 27, 2010
problem using geeglm: R keeps crashing
1 msg
Chris Howden problem using geeglm: R keeps crashing Nov 27, 2010
problem using geeglm: R keeps crashing
1 msg
Chris Howden problem using geeglm: R keeps crashing Nov 26, 2010
lmer vs SAS results
4 msgs
Beth Holbrook lmer vs SAS results Nov 23, 2010
David Duffy lmer vs SAS results Nov 23, 2010
Ben Bolker lmer vs SAS results Nov 24, 2010
Douglas Bates lmer vs SAS results Nov 26, 2010
weights argument in lme
1 msg
Tim Carnus weights argument in lme Nov 25, 2010
difficulty setting the random = argument to lme()
1 msg
Robert Kinley difficulty setting the random = argument to lme() Nov 25, 2010
P value value for a large number of degree of freedom in lmer
15 msgs
Arnaud Mosnier P value value for a large number of degree of freedom in lmer Nov 23, 2010
Rolf Turner P value value for a large number of degree of freedom in lmer Nov 23, 2010
Arnaud Mosnier P value value for a large number of degree of freedom in lmer Nov 23, 2010
Rolf Turner P value value for a large number of degree of freedom in lmer Nov 23, 2010
Joshua Wiley P value value for a large number of degree of freedom in lmer Nov 23, 2010
Petar Milin P value value for a large number of degree of freedom in lmer Nov 23, 2010
Ben Bolker P value value for a large number of degree of freedom in lmer Nov 23, 2010
Steven J. Pierce P value value for a large number of degree of freedom in lmer Nov 23, 2010
Jonathan Baron P value value for a large number of degree of freedom in lmer Nov 23, 2010
Rolf Turner P value value for a large number of degree of freedom in lmer Nov 23, 2010
Joshua Wiley P value value for a large number of degree of freedom in lmer Nov 23, 2010
John Maindonald P value value for a large number of degree of freedom in lmer Nov 23, 2010
John Maindonald P value value for a large number of degree of freedom in lmer Nov 23, 2010
Jonathan Baron P value value for a large number of degree of freedom in lmer Nov 24, 2010
Emmanuel Charpentier P value value for a large number of degree of freedom in lmer Nov 25, 2010
deviance residuals, leverage, hat matrix...
1 msg
montagnini deviance residuals, leverage, hat matrix... Nov 24, 2010
Need advice on model specification for repeated measures on split-plot design
1 msg
Taylor, Jason Need advice on model specification for repeated measures on split-plot design Nov 24, 2010
lmer predicted and fitted values differ
5 msgs
Amy Wade lmer predicted and fitted values differ Nov 24, 2010
ONKELINX, Thierry lmer predicted and fitted values differ Nov 24, 2010
Amy Wade lmer predicted and fitted values differ Nov 24, 2010
ONKELINX, Thierry lmer predicted and fitted values differ Nov 24, 2010
Amy Wade lmer predicted and fitted values differ Nov 24, 2010
Validation of mixed model for nested data
1 msg
Javier Martínez-López Validation of mixed model for nested data Nov 24, 2010
eager for Gamma capability in lme4
1 msg
Teresa Iglesias eager for Gamma capability in lme4 Nov 23, 2010
correlation test and Bonferroni
2 msgs
Steve Hong correlation test and Bonferroni Nov 23, 2010
Dennis Murphy correlation test and Bonferroni Nov 23, 2010
lmer vs SAS results
1 msg
Darren Norris lmer vs SAS results Nov 23, 2010
lmer vs SAS results
1 msg
Beth Holbrook lmer vs SAS results Nov 23, 2010
lme4a build broken?
1 msg
Ben Bolker lme4a build broken? Nov 23, 2010
help with model convergence
5 msgs
Ben Bolker help with model convergence Nov 1, 2010
David Stainbrook Dealing with Overdispersion in Count Data with Mixed Modeling Nov 11, 2010
Ben Bolker Dealing with Overdispersion in Count Data with Mixed Modeling Nov 11, 2010
David Stainbrook Dealing with Overdispersion in Count Data with Mixed Modeling Nov 23, 2010
Ben Bolker Dealing with Overdispersion in Count Data with Mixed Modeling Nov 23, 2010
P value value for a large number of degree of freedom in lmer
1 msg
Steven McKinney P value value for a large number of degree of freedom in lmer Nov 23, 2010
Fitted values for binomial family in lme4a{glmer}
1 msg
Kevin E. Thorpe Fitted values for binomial family in lme4a{glmer} Nov 23, 2010
Need advice on model specification for repeated measures on split-plot design
1 msg
Taylor, Jason Need advice on model specification for repeated measures on split-plot design Nov 22, 2010
problems with the variance in lmer
2 msgs
catferr problems with the variance in lmer Nov 22, 2010
Ben Bolker problems with the variance in lmer Nov 22, 2010
Expected correlation in a mixed model
3 msgs
S Ellison Expected correlation in a mixed model Nov 22, 2010
Andrew Robinson Expected correlation in a mixed model Nov 22, 2010
Ben Bolker Expected correlation in a mixed model Nov 22, 2010
R-sig-mixed-models Digest, Vol 47, Issue 39
1 msg
Ryan King R-sig-mixed-models Digest, Vol 47, Issue 39 Nov 22, 2010
Are prediction interval values ungettable?
6 msgs
Petar Milin Are prediction interval values ungettable? Nov 20, 2010
Andrew Robinson Are prediction interval values ungettable? Nov 20, 2010
Petar Milin Are prediction interval values ungettable? Nov 20, 2010
Andrew Robinson Are prediction interval values ungettable? Nov 20, 2010
Dimitris Rizopoulos Are prediction interval values ungettable? Nov 21, 2010
Petar Milin Are prediction interval values ungettable? Nov 21, 2010
Question on overdispersion
3 msgs
ONKELINX, Thierry Question on overdispersion Nov 19, 2010
Jarrod Hadfield Question on overdispersion Nov 19, 2010
ONKELINX, Thierry Question on overdispersion Nov 19, 2010
Logistic regression with factorial effect
4 msgs
Billy Logistic regression with factorial effect Nov 18, 2010
David Duffy Logistic regression with factorial effect Nov 18, 2010
Sibylle Stöckli LME and TukeyHSD Nov 19, 2010
Christoph Scherber LME and TukeyHSD Nov 19, 2010
How to install lme4a
1 msg
Tahira Jamil How to install lme4a Nov 19, 2010
Help with lmer, nested data and repeated measures
3 msgs
Simon Garnier Help with lmer, nested data and repeated measures Nov 18, 2010
Andrew Robinson Help with lmer, nested data and repeated measures Nov 18, 2010
Simon Garnier Help with lmer, nested data and repeated measures Nov 18, 2010
LME and TukeyHSD
2 msgs
Sibylle Stöckli LME and TukeyHSD Nov 18, 2010
Christoph Scherber LME and TukeyHSD Nov 18, 2010
glmer with/without intercept gave different results
6 msgs
Chang, Yu-Mei glmer with/without intercept gave different results Nov 18, 2010
ONKELINX, Thierry glmer with/without intercept gave different results Nov 18, 2010
Chang, Yu-Mei glmer with/without intercept gave different results Nov 18, 2010
Jarrod Hadfield glmer with/without intercept gave different results Nov 18, 2010
Chang, Yu-Mei glmer with/without intercept gave different results Nov 18, 2010
Jarrod Hadfield glmer with/without intercept gave different results Nov 18, 2010
declaring the variables
3 msgs
Andrew Dolman declaring the variables Nov 17, 2010
Douglas Bates declaring the variables Nov 17, 2010
Andrew Dolman declaring the variables Nov 17, 2010
Problem with lmer crashing on x64 server
1 msg
Camille Szmaragd Problem with lmer crashing on x64 server Nov 17, 2010
declaring the variables
4 msgs
Michael Larkin declaring the variables Nov 16, 2010
Andrew Dolman declaring the variables Nov 16, 2010
Petar Milin declaring the variables Nov 17, 2010
Petar Milin declaring the variables Nov 17, 2010
Question about GLMER
3 msgs
Douglas Bates Question about GLMER Nov 16, 2010
Daniel Jeske Question about GLMER Nov 16, 2010
Douglas Bates Question about GLMER Nov 16, 2010
parameterization for partly nested design with repeated measurements
8 msgs
Kay Cichini parameterization for partly nested design with repeated measurements Nov 12, 2010
Douglas Bates parameterization for partly nested design with repeated measurements Nov 12, 2010
Kay Cichini parameterization for partly nested design with repeated measurements Nov 12, 2010
Douglas Bates parameterization for partly nested design with repeated measurements Nov 13, 2010
Marina SAADIA OTERO parameterization for partly nested design with repeated measurements Nov 13, 2010
Andrew Dolman parameterization for partly nested design with repeated measurements Nov 15, 2010
Dennis Murphy parameterization for partly nested design with repeated measurements Nov 15, 2010
Marina SAADIA OTERO parameterization for partly nested design with repeated measurements Nov 16, 2010
Prediction interval values
1 msg
Petar Milin Prediction interval values Nov 16, 2010
Analysis of signal detection data
2 msgs
Ed Merkle Analysis of signal detection data Nov 15, 2010
Michael Lawrence Analysis of signal detection data Nov 15, 2010
Analysis of signal detection data
4 msgs
Michael Lawrence Analysis of signal detection data Nov 14, 2010
Thompson,Paul Analysis of signal detection data Nov 14, 2010
David Duffy Analysis of signal detection data Nov 14, 2010
Ken Knoblauch Analysis of signal detection data Nov 15, 2010
Analysis of signal detection data
1 msg
John Sorkin Analysis of signal detection data Nov 14, 2010
glmer Z-test with individual random effects
7 msgs
Jens Åström glmer Z-test with individual random effects Nov 11, 2010
Ben Bolker glmer Z-test with individual random effects Nov 11, 2010
John Maindonald glmer Z-test with individual random effects Nov 11, 2010
Jarrod Hadfield glmer Z-test with individual random effects Nov 12, 2010
John Maindonald glmer Z-test with individual random effects Nov 12, 2010
Andrew Dolman glmer Z-test with individual random effects Nov 13, 2010
Jarrod Hadfield glmer Z-test with individual random effects Nov 13, 2010
profile, confint and p-values in lme4
2 msgs
Marie-Hélène Hachey profile, confint and p-values in lme4 Nov 10, 2010
Douglas Bates profile, confint and p-values in lme4 Nov 12, 2010
more info for "profile", "confint" and p-values
1 msg
Marie-Hélène Hachey more info for "profile", "confint" and p-values Nov 11, 2010
dealing with nestedness
1 msg
Taylor, Jason dealing with nestedness Nov 10, 2010
lmer with fixed effects size restrictions?
1 msg
Orna Intrator lmer with fixed effects size restrictions? Nov 10, 2010
standardized residuals
4 msgs
Michael Larkin standardized residuals Nov 9, 2010
Titus von der Malsburg standardized residuals Nov 9, 2010
Dennis Murphy standardized residuals Nov 9, 2010
Douglas Bates standardized residuals Nov 10, 2010
quasi-binomial family in lme4
8 msgs
Gosselin Frederic quasi-binomial family in lme4 Nov 9, 2010
John Maindonald quasi-binomial family in lme4 Nov 10, 2010
Gosselin Frederic quasi-binomial family in lme4 Nov 10, 2010
Jarrod Hadfield quasi-binomial family in lme4 Nov 10, 2010
Aidan Keane quasi-binomial family in lme4 Nov 10, 2010
Gosselin Frederic quasi-binomial family in lme4 Nov 10, 2010
Jarrod Hadfield quasi-binomial family in lme4 Nov 10, 2010
Douglas Bates quasi-binomial family in lme4 Nov 10, 2010
crossed random effect
2 msgs
Cristian Pasquaretta crossed random effect Nov 10, 2010
ONKELINX, Thierry crossed random effect Nov 10, 2010
Is there a problem with the lme4a package at R-Forge
7 msgs
Kevin E. Thorpe Is there a problem with the lme4a package at R-Forge Nov 9, 2010
Kevin E. Thorpe Is there a problem with the lme4a package at R-Forge Nov 10, 2010
Kevin E. Thorpe Is there a problem with the lme4a package at R-Forge Nov 10, 2010
Ben Bolker Is there a problem with the lme4a package at R-Forge Nov 10, 2010
Douglas Bates Is there a problem with the lme4a package at R-Forge Nov 10, 2010
Douglas Bates Is there a problem with the lme4a package at R-Forge Nov 10, 2010
Kevin E. Thorpe Is there a problem with the lme4a package at R-Forge Nov 10, 2010
quasi-binomial family in lme4
5 msgs
T. Florian Jaeger quasi-binomial family in lme4 Nov 7, 2010
Jarrod Hadfield quasi-binomial family in lme4 Nov 9, 2010
Douglas Bates quasi-binomial family in lme4 Nov 9, 2010
Jarrod Hadfield quasi-binomial family in lme4 Nov 9, 2010
T. Florian Jaeger quasi-binomial family in lme4 Nov 9, 2010
quasi-binomial family in lme4
1 msg
Ben Bolker quasi-binomial family in lme4 Nov 9, 2010
mixed models for non independet data sets (glmer)
1 msg
Javier Martínez-López mixed models for non independet data sets (glmer) Nov 8, 2010
Questions - the stepwise selection issue.
1 msg
Ned Dochtermann Questions - the stepwise selection issue. Nov 8, 2010
IRT: discrimination parameters from LMER?
8 msgs
dave fournier IRT: discrimination parameters from LMER? Nov 1, 2010 Paul Johnson IRT: discrimination parameters from LMER? Nov 1, 2010
Doran, Harold IRT: discrimination parameters from LMER? Nov 2, 2010
Doran, Harold IRT: discrimination parameters from LMER? Nov 2, 2010
Dimitris Rizopoulos IRT: discrimination parameters from LMER? Nov 2, 2010
Paul Johnson IRT: discrimination parameters from LMER? Nov 6, 2010
Doran, Harold IRT: discrimination parameters from LMER? Nov 8, 2010
Doran, Harold IRT: discrimination parameters from LMER? Nov 8, 2010
Questions - next steps in GLMM analysis on nested ecological dataset
6 msgs
Shawn McCracken Questions - next steps in GLMM analysis on nested ecological dataset Nov 3, 2010
Shawn McCracken Questions - next steps in GLMM analysis on nested ecological dataset Nov 7, 2010
Ben Bolker Questions - next steps in GLMM analysis on nested ecological dataset Nov 7, 2010
John Maindonald Questions - the stepwise selection issue. Nov 7, 2010
Andrew Kosydar Questions - the stepwise selection issue. Nov 7, 2010
Ben Bolker Questions - the stepwise selection issue. Nov 8, 2010
I am liable to be slow to respond to email during the next two weeks
1 msg
Douglas Bates I am liable to be slow to respond to email during the next two weeks Nov 7, 2010
sandwich variance estimation using glmer?
17 msgs
T.D. Rudolph sandwich variance estimation using glmer? Nov 2, 2010
Doran, Harold sandwich variance estimation using glmer? Nov 3, 2010
Dimitris Rizopoulos sandwich variance estimation using glmer? Nov 3, 2010
T.D. Rudolph sandwich variance estimation using glmer? Nov 3, 2010
David Atkins sandwich variance estimation using glmer? Nov 3, 2010
Andrew Robinson sandwich variance estimation using glmer? Nov 3, 2010
T.D. Rudolph sandwich variance estimation using glmer? Nov 3, 2010
Rolf Turner sandwich variance estimation using glmer? Nov 3, 2010
Andrew Robinson sandwich variance estimation using glmer? Nov 3, 2010
Doran, Harold sandwich variance estimation using glmer? Nov 4, 2010
Ben Bolker sandwich variance estimation using glmer? Nov 4, 2010
David Atkins sandwich variance estimation using glmer? Nov 4, 2010
Jeremy Pais sandwich variance estimation using glmer? Nov 4, 2010
Andrew Robinson sandwich variance estimation using glmer? Nov 4, 2010
David Atkins sandwich variance estimation using glmer? Nov 5, 2010
Ben Bolker t-distributed residuals [was Re: sandwich variance estimation using glmer?] Nov 5, 2010
Whit Armstrong t-distributed residuals [was Re: sandwich variance estimation using glmer?] Nov 5, 2010
getting the residuals from the model
2 msgs
Michael Larkin getting the residuals from the model Nov 4, 2010
Luciano Selzer getting the residuals from the model Nov 4, 2010
Has anyone tried Whit Armstrong's CppMCMC library?
4 msgs
Douglas Bates Has anyone tried Whit Armstrong's CppMCMC library? Nov 2, 2010
Whit Armstrong Has anyone tried Whit Armstrong's CppMCMC library? Nov 2, 2010
Whit Armstrong Has anyone tried Whit Armstrong's CppMCMC library? Nov 3, 2010
Douglas Bates Has anyone tried Whit Armstrong's CppMCMC library? Nov 4, 2010
derivative for nlmer
1 msg
Raquel Souza Dias derivative for nlmer Nov 3, 2010
proportions data
1 msg
mikhail matz proportions data Nov 2, 2010
psychometric function fitting with lmer?
1 msg
Paul Johnson psychometric function fitting with lmer? Nov 1, 2010
R-sig-mixed-models Digest, Vol 47, Issue 2
1 msg
Nicholas Lewin-Koh R-sig-mixed-models Digest, Vol 47, Issue 2 Nov 1, 2010