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R-SIG-mixed-models May 2014

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reference for expression given on glmm wiki
1 msg
Juliet Hannah reference for expression given on glmm wiki May 30, 2014
[Lme4-authors] lmer/glmer false positive in convergence problems
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Ben Bolker lmer/glmer false positive in convergence problems May 29, 2014
citable references for profile likelihood CIs
5 msgs
Jake Westfall citable references for profile likelihood CIs May 28, 2014
Joshua Wiley citable references for profile likelihood CIs May 29, 2014
Matthew Wolak citable references for profile likelihood CIs May 29, 2014
Ben Bolker citable references for profile likelihood CIs May 29, 2014
Jake Westfall citable references for profile likelihood CIs May 29, 2014
Coefplot2 availability? or How to interpret?
2 msgs
Lucinda Kirkpatrick Coefplot2 availability? or How to interpret? May 26, 2014
Ben Bolker Coefplot2 availability? or How to interpret? May 28, 2014
following up reply regarding false positives
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John Kingston following up reply regarding false positives May 27, 2014
Anomalous results with glmer().
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Rolf Turner Anomalous results with glmer(). May 27, 2014
Ben Bolker Anomalous results with glmer(). May 27, 2014
Rolf Turner Anomalous results with glmer(). May 27, 2014
David Duffy Anomalous results with glmer(). May 27, 2014
Ben Bolker Anomalous results with glmer(). May 27, 2014
Rolf Turner Anomalous results with glmer(). May 27, 2014
false positives?
2 msgs
John Kingston false positives? May 25, 2014
Ben Bolker false positives? May 27, 2014
Mixed modelling and GLMM course in Banff, Canada
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Highland Statistics Ltd Mixed modelling and GLMM course in Banff, Canada May 26, 2014
update to previous message about false positives
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John Kingston update to previous message about false positives May 25, 2014
{dsm} warning message "step size truncated due to divergence"
2 msgs
Ricardo Lima {dsm} warning message "step size truncated due to divergence" May 25, 2014
Ben Bolker {dsm} warning message "step size truncated due to divergence" May 25, 2014
LMER
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Ben Bolker LMER May 24, 2014
Getting each bootstrapped data frame from bootMer
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Daniel Hocking Getting each bootstrapped data frame from bootMer May 22, 2014
Ben Bolker Getting each bootstrapped data frame from bootMer May 24, 2014
Regions of significance plot for multilevel logistic regression model
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Ben Bolker Regions of significance plot for multilevel logistic regression model May 24, 2014
Help: mixed model with nested structure
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Zia Ahmed Help: mixed model with nested structure May 24, 2014
negative Hessian eigenvalues
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Tobias Heed negative Hessian eigenvalues May 23, 2014
Ben Bolker negative Hessian eigenvalues May 23, 2014
Previous messageNext messageBack to messages Post-hoc tests on linear mixed model give mixed results.‏
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Claire Previous messageNext messageBack to messages Post-hoc tests on linear mixed model give mixed results.‏ May 22, 2014
Zero inflated mixed model with constraint (lasso or other)
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guillaume chaumet Zero inflated mixed model with constraint (lasso or other) May 22, 2014
How to interpret verbose output
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Stuart Luppescu How to interpret verbose output May 21, 2014
Ben Bolker How to interpret verbose output May 21, 2014
glmer warning "fixed-effect model matrix is rank deficient"
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Dan McCloy glmer warning "fixed-effect model matrix is rank deficient" May 21, 2014
glmer warning "fixed-effect model matrix is rank deficient"
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Dan McCloy glmer warning "fixed-effect model matrix is rank deficient" May 21, 2014
Assessing Normality for Mixed Models
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Viechtbauer Wolfgang (STAT) Assessing Normality for Mixed Models May 21, 2014
recent message not posted
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John Kingston recent message not posted May 21, 2014
] Zero inflated mixed model with constraint (lasso or other)
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guillaume chaumet ] Zero inflated mixed model with constraint (lasso or other) May 21, 2014
Assessing Normality for Mixed Models
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AvianResearchDivision Assessing Normality for Mixed Models May 20, 2014
Lionel Assessing Normality for Mixed Models May 20, 2014
Lionel Assessing Normality for Mixed Models May 20, 2014
Emmanuel Curis Assessing Normality for Mixed Models May 20, 2014
Chris Howden Assessing Normality for Mixed Models May 20, 2014
Farrar, David Assessing Normality for Mixed Models May 21, 2014
AvianResearchDivision Assessing Normality for Mixed Models May 21, 2014
Calculations and interpretation of ordered logit model with clmm() and related functions
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Christian Brauner Calculations and interpretation of ordered logit model with clmm() and related functions May 20, 2014
about the glmer function
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Ben Bolker about the glmer function May 20, 2014
transformation of BLUPs to response scale
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John.Morrongiello at csiro.au transformation of BLUPs to response scale May 20, 2014
Variance of predictions from lme4 models at existing levels?
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Julien Riou Variance of predictions from lme4 models at existing levels? May 20, 2014
"parm" parameter in lme4::confint.merMod
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Jake Westfall "parm" parameter in lme4::confint.merMod May 17, 2014
Henrik Singmann "parm" parameter in lme4::confint.merMod May 18, 2014
Ben Bolker "parm" parameter in lme4::confint.merMod May 18, 2014
Jake Westfall "parm" parameter in lme4::confint.merMod May 19, 2014
Ben Bolker "parm" parameter in lme4::confint.merMod May 19, 2014
Jake Westfall "parm" parameter in lme4::confint.merMod May 19, 2014
Dr C B Stride Regions of significance plot for multilevel logistic regression model May 19, 2014
Ben Bolker Regions of significance plot for multilevel logistic regression model May 19, 2014
[Lme4-authors] A Question Regarding a Warning Message Generated from Fitting a 'glmer' Model
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Ben Bolker A Question Regarding a Warning Message Generated from Fitting a 'glmer' Model May 19, 2014
starting value setting in glmer
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Ben Bolker starting value setting in glmer May 19, 2014
fixed effects estimates too small in binomial GLMM with low "success"-rate (
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Solis fixed effects estimates too small in binomial GLMM with low "success"-rate ( May 19, 2014
Ben Bolker fixed effects estimates too small in binomial GLMM with low "success"-rate ( May 19, 2014
Course: Introduction to GAM and GAMM with R
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Highland Statistics Ltd Course: Introduction to GAM and GAMM with R May 19, 2014
fixed effects estimates too small in binomial GLMM with low "success"-rate
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Henrik Singmann fixed effects estimates too small in binomial GLMM with low "success"-rate May 17, 2014
Ben Bolker fixed effects estimates too small in binomial GLMM with low "success"-rate May 17, 2014
Henrik Singmann fixed effects estimates too small in binomial GLMM with low "success"-rate May 17, 2014
glmer syntax for model with "common" random effects
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ONKELINX, Thierry glmer syntax for model with "common" random effects May 16, 2014
Martin Stjernman glmer syntax for model with "common" random effects May 16, 2014
ONKELINX, Thierry glmer syntax for model with "common" random effects May 16, 2014
error en glmmadmb
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CRISTINA.COCCIA error en glmmadmb May 15, 2014
ANOVA type lll ss table for GLMER?
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Heather Moylett ANOVA type lll ss table for GLMER? May 14, 2014
Henrik Singmann ANOVA type lll ss table for GLMER? May 14, 2014
Ben Bolker ANOVA type lll ss table for GLMER? May 14, 2014
Henrik Singmann ANOVA type lll ss table for GLMER? May 15, 2014
Doubts about models in glmmADMB
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Carlos Barboza Doubts about models in glmmADMB May 13, 2014
Ben Bolker Doubts about models in glmmADMB May 13, 2014
Carlos Barboza Doubts about models in glmmADMB May 14, 2014
Ben Bolker Doubts about models in glmmADMB May 14, 2014
Carlos Barboza Doubts about models in glmmADMB May 14, 2014
Wrong convergence warnings with glmer in lme4 version 1.1-6??
2 msgs
UG Wrong convergence warnings with glmer in lme4 version 1.1-6?? May 14, 2014
Ben Bolker Wrong convergence warnings with glmer in lme4 version 1.1-6?? May 14, 2014
previous posts about error message in glmmADMB
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Lena previous posts about error message in glmmADMB May 14, 2014
Can an uninformative prior be too diffuse?
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Iain Stott Can an uninformative prior be too diffuse? May 12, 2014
Jarrod Hadfield Can an uninformative prior be too diffuse? May 12, 2014
Iain Stott Can an uninformative prior be too diffuse? May 14, 2014
Assumptions of GLMMs
3 msgs
Baggett, Aaron Assumptions of GLMMs May 13, 2014
Ben Bolker Assumptions of GLMMs May 13, 2014
Henrik Singmann Assumptions of GLMMs May 14, 2014
accounting for overdispersion in binary GLMM in lme4
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Thomas Merkling accounting for overdispersion in binary GLMM in lme4 May 13, 2014
Ben Bolker accounting for overdispersion in binary GLMM in lme4 May 13, 2014
Power Analysis for Linear Mixed Model with Covariates
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Gerasimos Fergadiotis Power Analysis for Linear Mixed Model with Covariates May 13, 2014
Ulf Köther Power Analysis for Linear Mixed Model with Covariates May 13, 2014
Diagnosing Overdispersion in Mixed Models with Parametric Bootstrapping
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Xavier Harrison Diagnosing Overdispersion in Mixed Models with Parametric Bootstrapping May 13, 2014
Significance of fixed effects. Kinship package (Marc Moragues)
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Witold Proskura Significance of fixed effects. Kinship package (Marc Moragues) May 10, 2014
Ben Bolker Significance of fixed effects. Kinship package (Marc Moragues) May 12, 2014
Diagnosing Overdispersion in Mixed Models with Parametric Bootstrapping
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Xavier Harrison Diagnosing Overdispersion in Mixed Models with Parametric Bootstrapping May 12, 2014
Ben Bolker Diagnosing Overdispersion in Mixed Models with Parametric Bootstrapping May 12, 2014
glmer syntax for model with "common" random effects
2 msgs
orzack at freshpond.org glmer syntax for model with "common" random effects May 12, 2014
ONKELINX, Thierry glmer syntax for model with "common" random effects May 12, 2014
Zero alteration and mixed models?
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Kirsty Gurney Zero alteration and mixed models? May 8, 2014
Ben Bolker Zero alteration and mixed models? May 10, 2014
lme4 question
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Francis, David lme4 question May 8, 2014
Ben Bolker lme4 question May 10, 2014
pedigreemm with one observation per individual
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Witold Proskura pedigreemm with one observation per individual May 6, 2014
Ben Bolker pedigreemm with one observation per individual May 9, 2014
difference in lmer results with REML = FALSE and refitML
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Henrik Singmann difference in lmer results with REML = FALSE and refitML May 8, 2014
Ben Bolker difference in lmer results with REML = FALSE and refitML May 9, 2014
Accessing and updating lmer objects
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Asaf Weinstein Accessing and updating lmer objects May 5, 2014
Ben Bolker Accessing and updating lmer objects May 6, 2014
Vincent Dorie Accessing and updating lmer objects May 8, 2014
Ben Bolker Accessing and updating lmer objects May 8, 2014
conditional AIC (cAIC) for lmer
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Corey Sparks conditional AIC (cAIC) for lmer May 7, 2014
conditional AIC (cAIC) for lmer
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John.Morrongiello at csiro.au conditional AIC (cAIC) for lmer May 6, 2014
gamm4 error with large dataset
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Daniel Hocking gamm4 error with large dataset May 5, 2014
glmmADMB zero-inflated poisson model. How to solve
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laura laura glmmADMB zero-inflated poisson model. How to solve May 5, 2014
ONKELINX, Thierry glmmADMB zero-inflated poisson model. How to solve May 5, 2014
standardized coefficients in lme4 package
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Simon Sun standardized coefficients in lme4 package May 3, 2014
Andrea Cantieni standardized coefficients in lme4 package May 5, 2014
extract specific values from lmer summary
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Ben Bolker extract specific values from lmer summary May 4, 2014
BOBYQA warning message
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Devin Kearns BOBYQA warning message May 3, 2014
Ben Bolker BOBYQA warning message May 4, 2014
Why do extremely similar parametric bootstraps on lmer() objects yield (not only marginally) different results?
4 msgs
Christian Brauner Why do extremely similar parametric bootstraps on lmer() objects yield (not only marginally) different results? May 3, 2014
Ben Bolker Why do extremely similar parametric bootstraps on lmer() objects yield (not only marginally) different results? May 3, 2014
Christian Brauner Why do extremely similar parametric bootstraps on lmer() objects yield (not only marginally) different results? May 3, 2014
Christian Brauner Why do extremely similar parametric bootstraps on lmer() objects yield (not only marginally) different results? May 4, 2014
p values for random effects in an unbalanced nested mixed model
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Stacey Williams p values for random effects in an unbalanced nested mixed model May 3, 2014
Lionel p values for random effects in an unbalanced nested mixed model May 4, 2014
[Lme4-authors] Fixing the level 1 residual variance
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Ben Bolker Fixing the level 1 residual variance May 2, 2014
Douglas Bates Fixing the level 1 residual variance May 2, 2014
Ben Bolker Fixing the level 1 residual variance May 2, 2014
extract specific values from lmer summary
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Ben Bolker extract specific values from lmer summary May 2, 2014
Mixed-effects conditional logistic regression in lme4 v. 1.0-4 and above
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Ben Bolker Mixed-effects conditional logistic regression in lme4 v. 1.0-4 and above May 1, 2014
Mixed-effects conditional logistic regression in lme4 v. 1.0-4 and above
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Ben Bolker Mixed-effects conditional logistic regression in lme4 v. 1.0-4 and above May 1, 2014
gamm4 error with large dataset
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Ben Bolker gamm4 error with large dataset May 1, 2014
MCMCglmm: starting values and variance explained by random effects
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Jarrod Hadfield MCMCglmm: starting values and variance explained by random effects Apr 30, 2014
Mieke Zwart MCMCglmm: starting values and variance explained by random effects May 1, 2014