How to run an Auto Regressive Generalized Linear Mixed Model

Hello all,

I'm trying to run Auto Regressive Linear Mixed Models in R using the nlme()
package. For my continuous response variables I have used lme() with the
correlation set as 'corAR1()', but one of my response variables has a
poisson distribution (i.e.- count of number of conductive xylem cells). I
was wondering how to run an AR Generalized LMM within the nlme() package,
or if there was another solution to this. Thanks so much for your help.

Cheers,

Danielle Rudley

PhD Candidate
Forest Research Centre (CEF)
School of Agriculture, University of Lisbon
Tapada da Ajuda, 1349-017 Lisboa, Portugal

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