MixMod lsmeans question

Here's the data and the code :

aggTc=read.csv("aggTc.csv")

library(lme4)
library(MixMod)

CRT.lmer=lmer(log(CRT)~test*fatigue*wakefulness+ (1|subject),data=aggTc)

totalAnalysis(CRT.lmer,aggTc)

As you could observe, lmer part shows us no interaction effect except
fatigue:wakefulness but second "lsmeans" part shows every significant
effects...

Guillaume Chaumet




2012/9/10 Alexandra Kuznetsova <alku at imm.dtu.dk>

If for lsmeans table you use lsmeans function, then all the least squares
means will be calculated for all effects (for non significant ones as
well), if for lsmeans table you use totalAnalysis function, then by default
only for significant effects lsmeans will be calculated. Does this answers
your question?

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