[EXT] Re: partial effects plots

I'm not sure if the partial effects plots differ from what emmeans, ggeffects, effects etc. plot by default.
Isn't another name for "partial effects plots" the "added variables plot", implemented in car::avPlot() / car::avPlots()?

Not sure if mixed models are supported, though.

-----Urspr?ngliche Nachricht-----
Von: R-sig-mixed-models <r-sig-mixed-models-bounces at r-project.org> Im Auftrag von Ben Bolker
Gesendet: Dienstag, 30. Juli 2024 22:18
An: r-sig-mixed-models at r-project.org
Betreff: [EXT] Re: [R-sig-ME] partial effects plots

   Start with emmeans or effects packages? In particular

library(effects)

plot(allEffects(fitted_model))

Hello all,

I have fit a GLMM to presence/absence data (family = binomial) from an acoustic telemetry study. I have five fixed effects-Year (a factor), Day of Year, Hour of Day, Sex (a factor), and water temperature-and one random effect-Fish ID (a factor). I am looking to create partial effects plots for the covariates. Can anyone direct me to some sample code or suggest a package to help me get started. My Google searches haven't been very fruitful.

I would appreciate any assistance on this matter. Thank you for your time!


Best,

Laura


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Laura M. Lee
USFWS - Northeast Fishery Center
P.O. Box 75
308 Washington Ave.
Lamar, PA  16848
Phone: 570-726-4247 x 50122
Laura_Lee at fws.gov<mailto:Laura_Lee at fws.gov>
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