quasi-binomial family in lme4
Dear Doug, That would be very welcome. It might be nice for lmer to fit a residual term if quasi models are specified, since this now seems to be working? Cheers, Jarrod
On 9 Nov 2010, at 15:26, Douglas Bates wrote:
On Tue, Nov 9, 2010 at 9:02 AM, Jarrod Hadfield <j.hadfield at ed.ac.uk> wrote:
Hi Florian, This comes up regularly and the list (nearly) always stays silent. As far as I am aware quasi models in lmer do not, and never have, given sensible results. To model over-dispersion you can try fitting an observation-level random effect. For example: data$resid<-as.factor(1:dim(data)[1]) and fitting (1|resid) in the model formula. This year I have reviewed four papers that have used quasi models in lmer, and its no fun to tell the authors that their results may not be meaningful. To paraphrase an earlier post, why are they there if they do not work - it's irresponsible?
I agree. I should have removed them from lme4 long ago if I suspected that the results were not correct. I will do so (once I figure out how to forbid them).
On 8 Nov 2010, at 03:30, T. Florian Jaeger wrote:
Hi,
I am analyzing some data that seems to require a quasibinomial
model,
but the model returns incredibly small standard errors (and
correspondingly inflated t-values) that do not seem to be justified
given my data.
I've been reading (I think) all available posts on problems with the
quasi-binomial family in lme4. But I can't judge from the posts
whether all issues with the quasi-binomial models in lme4 are
assumed
to be resolved. So, I am wondering, are there any known issues with
quasi-binomial models in lme4?
I am using
Package: lme4
Version: 0.999375-35
Date: 2010-08-18
in environment:
_
platform i386-pc-mingw32
arch i386
os mingw32
system i386, mingw32
status
major 2
minor 11.1
year 2010
month 05
day 31
svn rev 52157
language R
version.string R version 2.11.1 (2010-05-31)
cheers,
Florian
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