Plot a "mer" object
Luciano La Sala <lucianolasala at ...> writes:
I fitted a glmm on a small dataset using lme4. Data consist of dependent variable "Egg_Volume" (continuous) and independent variables "Hatching Order" (3 factors: first, second, third), "Year" (2 factors: 2006, 2007) and their interaction (Hatching_Order*Year). Nest IDs were included as random intercepts.
[snip]
I've been trying to come to grips with the function "plotLMER.fnc" from "languageR" package to plot my results, but so far I have not succeeded.
From the relevant documentation
(http://bm2.genes.nig.ac.jp/RGM2/R_current/library/languageR/man/plotLMER.fn c.html) there are some arguments which I am not sure how to specify (indicated with "???" below). plotLMER.fnc(mixto.4a, xlabel = NA, xlabs = "Year", ylabel = "Egg Volume", ylimit = NA, fun = NA, pred = NA, n = ????, intr = ????, "end", mcmcMat = NA, lockYlim = TRUE, addlines = TRUE, withList = FALSE, cexsize = 0.5)
When in doubt, why not try leaving these arguments at their default values (n=100 and intr=NA)? Then, if you like the results, you're done ... (Gmane wants me to add more before it will let me post -- I don't want to quote any less than is here.)