Skip to content
Prev 6853 / 20628 Next

lme interpretation

Joanie VanDeWalle <r4inbow_ at ...> writes:
you don't need to add 'annee+site' to this model,
they are implicit in 'site*annee' (which expands to
'site+annee+site:annee'
In this case, since you have not included any interactions of
growth rate (effect of 'jour') with other predictions, coef(f9)["jour"]
should give you the growth rate for *all* individuals, and
summary(f9)["jour",] should give you the mean/SE etc.

  For other examples (those not represented as a single
parameter in the model), see ?predict.lme , and code on
http://glmm.wikidot.com/faq for getting SEs (although *note* 
that the recipe given there ignores uncertainty in 
the estimates of the random effects
variances).

  In some cases, the answer may depend on how you want to average
across the other predictors in the model.