lme nesting/interaction advice
On 12 May 2008, at 14:37, Doran, Harold wrote:
I haven't followed this thread carefully, so apologies if I'm too off base. But, in response to Rolf's questions/issues. First, SAS cannot handle models with crossed random effects (at least well at all). SAS is horribly incapable of handling even the simplest of models (especially generalized linear mixed models). I can cite numerous (recent) examples of SAS coming to a complete halt (proc nlmixed) for an analyses we were recently working on. R (and Ubuntu) was the only solution to our problem
First off, let's keep SAS out of this. I never used it, never wanted to use it and did not mention anywhere I wanted to get SAS-like results! Although, seeing how easily it creeps up, I can sympathise with those who have strog feelings about it! [for those with strong feelings about me, this is meant to be something joke-like]
Now, lme is not optimized for crossed random effects, but lmer is. That is why lmer is supported and lme is not really supported much. lmer is optimized for models with nested random effects and crossed random effects. When working with models with nested random effects, and software optimized for those problems (e.g., HLM, SAS, mlWin) the variance/covariance matrix forms a special, and simple structure that can be easily worked with. This is not the case for models with crossed random effects. Software packages designed for nested random effects can be tricked into handling models with crossed random effects, but this kludge is slow and really inefficient. If you want complete transparency into the why and how, here is a citation for your review.
Thank you very much. I'll read the paper and hopefully get the answers I was looking for. Best, Federico
Best
Harold
@article{Doran:Bates:Bliese:Dowling:2007:JSSOBK:v20i02,
author = "Harold Doran and Douglas Bates and Paul Bliese and
Maritza Dowling",
title = "Estimating the Multilevel Rasch Model: With the lme4
Package",
journal = "Journal of Statistical Software",
volume = "20",
number = "2",
pages = "1--18",
day = "22",
month = "2",
year = "2007",
CODEN = "JSSOBK",
ISSN = "1548-7660",
bibdate = "2007-02-22",
URL = "http://www.jstatsoft.org/v20/i02",
accepted = "2007-02-22",
acknowledgement = "",
keywords = "",
submitted = "2006-10-01",
}
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