"Non-positive definite approximate variance-covariance" output
Hi all, I was in a discussion with my advisor today, and the issue of "non-positive definite approximate variance-covariance" errors in R when using the lme() function arose. Depending on the varFunc specification that I use, I receive the "non-positive definite approximate variance-covariance" output when calling myModel$apVar -- however, there are standard errors returned for my model coefficients in the model summary. My understanding is that if the variance-covariance cannot be approximated, neither should the standard errors... how is the lme() function returning standard errors without a variance-covariance approximation? Many thanks, Jacob
Jacob J. Bukoski Master of Environmental Science Candidate, 2016 School of Forestry and Environmental Studies, Yale University jbukoski1 at gmail.com | jacob.bukoski at yale.edu | LinkedIn <https://www.linkedin.com/profile/view?id=AAIAAAdWVW8BMzqU_2EGNbEkyuy8O7K1Jyhd8ps&trk=nav_responsive_tab_profile_pic> [[alternative HTML version deleted]]