Weighting analysis in Lme4
Hopefully someone else will respond as well, but: As I understand it combining survey weighting with lme4's regression-based approach is tricky. lme4's weights argument does *not* (again as I understand it, this isn't my area) correspond to sample weights. If you google "site://stat.ethz.ch/pipermail/r-sig-mixed-models/ survey weights" you'll find a lot of discussion on the list, e.g. https://stat.ethz.ch/pipermail/r-sig-mixed-models/2014q4/022795.html Anyone have any new insights into this problem? Ben B.
On 16-12-08 03:25 PM, justine briaux wrote:
Dear Mr Bolker, I am a PHD student in Public Health and I am currently working on data collected with a complex survey design. These data were collected in 5 different districts/ strata (codpref) and 162 villages/cluster (numvill). In each village a representative sample of mother-infant pairs was surveyed. Some mother-infant pairs come from the same household (household= idmen). In order to consider those three interlocked levels I've done mixed model using the lme4 package in R glmer(undernutrition~household food insecurity+(1|codpref)+(1|numv ill)+(1|idmen),data=menme,family=binomial) I am wondering if I should weight my analysis in order to take into account the survey weights (pond) as the "survey package" would have done it. I saw in the R documentation that the argument "weight" exist in the lme4 package, does it correspond to survey weights? For instance, would it be correct to write: glmer(undernutrition~household food insecurity+(1|codpref)+(1|numvill)+(1|idmen),data=menme, weight= pond, family=binomial) I wanted to use the survey package but it does not allow me to do a mixed model and thus to take into accound the household level (idmen). I am really confused. What should I do? Thanks a lot for your help. Looking forward to hearing from you. Warm regards. Justine Briaux PHD student IRD, France <r-sig-mixed-models at r-project.org> [[alternative HTML version deleted]]
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