Hi all, I have what I hope is a relatively straightforward question. I?m running a model with MCMCglmm in which I have multiple chains. I?m able to combine estimates across chains for all the values I?m interested in via mcmc.list, but am having a hard time figuring out how to combine DIC values. I can get a DIC value for each chain, but would prefer a single value across chains, similar to what jags reports. Is this possible? Below is a quick example of obtaining separate, rather than a combined DIC value across chains. ##### library(MCMCglmm) data(Traffic,package="MASS") Traffic$year<-as.factor(Traffic$year) prior<-list(R=list(V=1,nu=0.002)) set.seed(1) m2a.5.1<-MCMCglmm(y ~ limit + year + day, family = "poisson", data = Traffic, prior = prior) set.seed(2) m2a.5.2<-MCMCglmm(y ~ limit + year + day, family = "poisson", data = Traffic, prior = prior) m2a.5.1$DIC;m2a.5.2$DIC #Separate DIC values Thanks, -- Daniel Anderson Research Assistant Behavioral Research and Teaching University of Oregon
DIC with multiple MCMCglmm chains
1 message · Daniel Anderson