Dear Prof. Bob, I have run an HLM model that contains an independent categorical variable (5 categories) at level 2. Four dummy variables entered into the model to represent the categorical variable. Since the dummy variables all test the null hypothesis of the categorical variable, do I need to adjust P-values to control the type-I error rate? Best, Shoeayb
dummy variables in hlm
2 messages · Shoeayb Qasemi, Phillip Alday
15 days later
This is a question which applies equally well to classical / non hierarchical models, so you can also use resources for those. That said, I'll answer here anyway. The answer is "maybe", for a few reasons. First, we often don't need to / bother worrying about multiple comparisons within a single regression model (Gelman, Hill and Yajima 2012; http://www.stat.columbia.edu/~gelman/research/published/multiple2f.pdf). That said, for large models, especially those with lots of interactions, multiple comparisons issues can become a problem, see e.g. this blog post https://deevybee.blogspot.com/2013/06/interpreting-unexpected-significant.html , which is presented with ANOVA, but which holds for multiple regression. Speaking of ANOVA ... the dummy variables don't all test the null hypothesis of the categorical variable per se, but instead test the null hypothesis for a single contrast derived from that categorical variable. If you want an omnibus test for your categorical variable, then you need to do something like ANOVA / analysis of deviance or a likelihood-ratio test. Since these yield a single test across all levels of the categorical variable, they don't have the multiple comparisons problem. In all cases, note that your choice of contrast coding has a big impact on the hypotheses that you're testing and whether or not things car::Anova() yield meaningful results. Phillip PS: I would recommend avoiding the Level 1 / Level 2 terminology. For many R packages, you don't need a strict nesting of levels and so the Level # terminology doesn't make much sense. I also generally find it quite confusing. Instead, try talking about fixed/population-level effects and random effects / variance components.
On 7/12/19 7:22 pm, Shoeayb Qasemi wrote:
Dear Prof. Bob, I have run an HLM model that contains an independent categorical variable (5 categories) at level 2. Four dummy variables entered into the model to represent the categorical variable. Since the dummy variables all test the null hypothesis of the categorical variable, do I need to adjust P-values to control the type-I error rate? Best, Shoeayb [[alternative HTML version deleted]]
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