Hello, Is there a way to conduct the Hausman test on models which have been estimated using lme4? To be more specific, My model assumption is that the plot size(X covariate) is correlated with the random intercept ( estimated from Household_ID) which will be estimated. So I have to find out how to tell lmer to consider this correlation. I would also, similarly, want to carry random effects where this correlation assumption is done away with. Finally, I want to conduct the Hausman test for model choice. Thank you, Regards, Yashree
Fixed vs random effects with lme4
4 messages · Poe, John, Yashree Mehta
Yep, Peter Westfall wrote up how to do it in an example script http://westfall.ba.ttu.edu/ISQS5349/Hausman_test_inR.txt Please be aware that the test does not imply that you shouldn't use random effects if there is correlation between a group-varying intercept and a lower level variable. It just means that you need to do something to properly model that correlation. That could be a within-group only model with dummy variables for groups (standard Fixed Effects models) or a group-mean centered model a la much of multilevel modeling. In econ this is known as a Hausman Taylor model (yes, the same Hausman as the test) or a correlated random effects model. You could also use a random slopes model to allow the variability in Xi across groups but it's less effective at debiasing than the other choices.
On Thu, Aug 23, 2018 at 11:09 AM Yashree Mehta <yashree19 at gmail.com> wrote:
Hello,
Is there a way to conduct the Hausman test on models which have been
estimated using lme4?
To be more specific,
My model assumption is that the plot size(X covariate) is correlated with
the random intercept ( estimated from Household_ID) which will be
estimated. So I have to find out how to tell lmer to consider this
correlation. I would also, similarly, want to carry random effects where
this correlation assumption is done away with. Finally, I want to conduct
the Hausman test for model choice.
Thank you,
Regards,
Yashree
[[alternative HTML version deleted]]
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Thanks, John John Poe, Ph.D. Postdoctoral Scholar / Research Methodologist Center for Public Health Services & Systems Research University of Kentucky www.johndavidpoe.com [[alternative HTML version deleted]]
Thank you very much for your reply. I see that the function "lm" is used for fixed effects and lmer for random effects. I want to use lmer and specify a random intercept for the fixed effects model. (In the terminology of efficiency analysis, it can be called " fixed effects-random intercept" model. To be more specific, A random intercept based on the Household_id is to be included for both models: 1) Where it is assumed that the random intercept is correlated with X-covariates (Fixed effects) 2)Where this not assumed. i.e. a correlation of 0. (Random effects) Having estimated the two models, I want to conduct the Hausman test. Thanks again, Regards, Yashree
On Thu, Aug 23, 2018 at 5:43 PM John Poe <jdpo223 at g.uky.edu> wrote:
Yep, Peter Westfall wrote up how to do it in an example script http://westfall.ba.ttu.edu/ISQS5349/Hausman_test_inR.txt Please be aware that the test does not imply that you shouldn't use random effects if there is correlation between a group-varying intercept and a lower level variable. It just means that you need to do something to properly model that correlation. That could be a within-group only model with dummy variables for groups (standard Fixed Effects models) or a group-mean centered model a la much of multilevel modeling. In econ this is known as a Hausman Taylor model (yes, the same Hausman as the test) or a correlated random effects model. You could also use a random slopes model to allow the variability in Xi across groups but it's less effective at debiasing than the other choices. On Thu, Aug 23, 2018 at 11:09 AM Yashree Mehta <yashree19 at gmail.com> wrote:
Hello,
Is there a way to conduct the Hausman test on models which have been
estimated using lme4?
To be more specific,
My model assumption is that the plot size(X covariate) is correlated with
the random intercept ( estimated from Household_ID) which will be
estimated. So I have to find out how to tell lmer to consider this
correlation. I would also, similarly, want to carry random effects where
this correlation assumption is done away with. Finally, I want to conduct
the Hausman test for model choice.
Thank you,
Regards,
Yashree
[[alternative HTML version deleted]]
_______________________________________________ R-sig-mixed-models at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-sig-mixed-models
-- Thanks, John John Poe, Ph.D. Postdoctoral Scholar / Research Methodologist Center for Public Health Services & Systems Research University of Kentucky www.johndavidpoe.com
I'm getting a bit confused by your language. A fixed effects model can either refer to a model with one intercept making no allowance for group variability (so all the effects are assumed fixed for the population) or a model where all between group variance is removed from the main variables via dummy variables, the within transform, first differencing or some other method and thus the betas represent the portion of the effect common to the population and thus fixed. If you want to do a hausman test you are comparing beta in a model with a group varying intercept random effect and beta in a model where between group effects are segregated via the above techniques. You do not include a random effect in both models. The hausman test is completely useless as a model specification tool if you're going to use both a group mean centered (within transform) to get the equivalent of a within group effects beta along with a group varying intercept (random effect).
On Aug 23, 2018 1:05 PM, "Yashree Mehta" <yashree19 at gmail.com> wrote:
Thank you very much for your reply. I see that the function "lm" is used for fixed effects and lmer for random effects. I want to use lmer and specify a random intercept for the fixed effects model. (In the terminology of efficiency analysis, it can be called " fixed effects-random intercept" model. To be more specific, A random intercept based on the Household_id is to be included for both models: 1) Where it is assumed that the random intercept is correlated with X-covariates (Fixed effects) 2)Where this not assumed. i.e. a correlation of 0. (Random effects) Having estimated the two models, I want to conduct the Hausman test. Thanks again, Regards, Yashree
On Thu, Aug 23, 2018 at 5:43 PM John Poe <jdpo223 at g.uky.edu> wrote:
Yep, Peter Westfall wrote up how to do it in an example script http://westfall.ba.ttu.edu/ISQS5349/Hausman_test_inR.txt Please be aware that the test does not imply that you shouldn't use random effects if there is correlation between a group-varying intercept and a lower level variable. It just means that you need to do something to properly model that correlation. That could be a within-group only model with dummy variables for groups (standard Fixed Effects models) or a group-mean centered model a la much of multilevel modeling. In econ this is known as a Hausman Taylor model (yes, the same Hausman as the test) or a correlated random effects model. You could also use a random slopes model to allow the variability in Xi across groups but it's less effective at debiasing than the other choices. On Thu, Aug 23, 2018 at 11:09 AM Yashree Mehta <yashree19 at gmail.com> wrote:
Hello,
Is there a way to conduct the Hausman test on models which have been
estimated using lme4?
To be more specific,
My model assumption is that the plot size(X covariate) is correlated with
the random intercept ( estimated from Household_ID) which will be
estimated. So I have to find out how to tell lmer to consider this
correlation. I would also, similarly, want to carry random effects where
this correlation assumption is done away with. Finally, I want to conduct
the Hausman test for model choice.
Thank you,
Regards,
Yashree
[[alternative HTML version deleted]]
_______________________________________________ R-sig-mixed-models at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-sig-mixed-models
-- Thanks, John John Poe, Ph.D. Postdoctoral Scholar / Research Methodologist Center for Public Health Services & Systems Research University of Kentucky www.johndavidpoe.com