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problem WITH mcmcsamp function in lme4 on Mac OSX
2 messages · HENERY Martin, José Manuel Blanco Moreno
I had the very same problem today on a PC. I have updated lme4 (just in case) but it did not solve the problem. Jos? M. HENERY Martin escribi?:
I was wondering if anyone else had experienced this problem and maybe could identify it as a possible bug rather than a problem peculiar to my particular computer. I have been trying to get confidence intervals via the mcmcsamp function in lme4 package but cannot get it to work on a mac running OS X. i ran exactly the same analyses on a PC with exactly the same commands and data and it worked fine. I removed both the matrix and lme4 packages from the library on the Mac (based on an unrelated problem with the lme4 package that I read about in the mailing list) and reinstalled them but to no avail. When I run the mcmcsamp function I get this error message (sorry its partly in french)
> model.glmer4=glmer(leaves.eaten ~ Geocytotype+Cypho.origin + (1|
TEST), data = cyphoplantfeeding, family=poisson)
> summary(mcmcsamp(model.glmer4 , n = 10000))
Erreur dans .local(object, n, verbose, ...) : Update not yet written Erreur dans summary(mcmcsamp(model.glmer4, n = 10000)) : erreur lors de l'?valuation de l'argument 'object' lors de la s?lection d'une m?thode pour la fonction 'summary' The same script runs fine on a PC so is what is the "update not yet written" referring to? Martin Henery [[alternative HTML version deleted]] ------------------------------------------------------------------------
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--------------------------------------- Jos? M. Blanco Moreno Dept. de Biologia Vegetal (Bot?nica) Universitat de Barcelona Av. Diagonal 645 08028 Barcelona SPAIN --------------------------------------- phone: (+34) 934 039 863 fax: (+34) 934 112 842 e-mail: jmblanco at ub.edu