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false convergence of lmer model
5 messages · Tara Woud, Neil Collier, Ben Bolker
Tara Woud <t.y.woud at ...> writes:
Dear all, To determine the effect of weather parameters on the amount of core areas of mallards (71 different mallards with measurements on several days), I'm trying to fit the following model to my data: model1 <- lmer(Core_areas ~ c_MaxTemp + I(c_MaxTemp^2) + c_MinTemp + I( c_MinTemp^2) + c_GemTemp + I(c_GemTemp^2) + c_D.rain + c_S.rain + c_Gemwind + c_Hwind + c_Lwind + (1 | Mallard) # random slope | random factor (here individual is random factor), family = poisson) But then I get the following warning message: In mer_finalize(ans) : false convergence (8) What consequences does this have? And had anybody an idea how I can solve this?? Best, Tara
[snip] Are you willing to try out the development version of lme4 (which will, hopefully, be released and become the CRAN version in about a week anyway)? See the Installation section at https://github.com/lme4/lme4/blob/master/README.md ... The new version tends to have fewer problems with false convergence and more flexibility for exploring and fixing convergence problems if they do occur. Ben Bolker
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On 13-07-24 03:21 AM, Tara Woud wrote:
Hi Ben, That sounds great, but I got the same error as Neil when entering the installation code. Tara
will be fixed in web page shortly Ben
2013/7/24 Neil Collier <neilandertal at gmail.com
<mailto:neilandertal at gmail.com>>
Hi Ben,
I think there is a typo in the installation code for lme4 from github:
install.packages("lme4",
repos=c("http://lme4.r-forge.r-project.org/repos",
getOptions("repos")["CRAN"]))
Message from R:
install.packages("lme4",
repos=c("http://lme4.r-forge.r-project.org/repos",
getOptions("repos")["CRAN"]))
Error in install.packages("lme4", repos = c("
http://lme4.r-forge.r-project.org/repos", :
could not find function "getOptions"
getOption not getOptions works.
Cheers,
Neil
On Tue, Jul 23, 2013 at 10:54 PM, Ben Bolker <bbolker at gmail.com
<mailto:bbolker at gmail.com>> wrote:
> Tara Woud <t.y.woud at ...> writes:
>
> >
> > Dear all,
> >
> > To determine the effect of weather parameters on the amount of
core areas
> > of mallards (71 different mallards with measurements on several
days),
> I'm
> > trying to fit the following model to my data:
> >
> > model1 <- lmer(Core_areas ~ c_MaxTemp + I(c_MaxTemp^2) +
c_MinTemp + I(
> > c_MinTemp^2) + c_GemTemp + I(c_GemTemp^2) + c_D.rain + c_S.rain +
> c_Gemwind +
> > c_Hwind + c_Lwind + (1 | Mallard) # random slope | random
factor (here
> > individual is random factor), family = poisson)
> >
> > But then I get the following warning message:
> >
> > In mer_finalize(ans) : false convergence (8)
> > What consequences does this have? And had anybody an idea how I
can solve
> > this??
> >
> > Best,
> >
> > Tara
> >
>
> [snip]
>
> Are you willing to try out the development version of lme4
> (which will, hopefully, be released and become the CRAN version
> in about a week anyway)? See the Installation section at
> https://github.com/lme4/lme4/blob/master/README.md ...
>
> The new version tends to have fewer problems with false convergence
> and more flexibility for exploring and fixing convergence problems
> if they do occur.
>
> Ben Bolker
>
> _______________________________________________
> R-sig-mixed-models at r-project.org
<mailto:R-sig-mixed-models at r-project.org> mailing list
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