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Problems with an anova mehtod to test for differences between groups in a lme ()
2 messages · R.S. Cotter, Douglas Bates
On 4/10/08, R.S. Cotter <cotter.rs at gmail.com> wrote:
Dear all, I have problems using anova mehtod to test for differences between groups in a lme () model. As described at page 224 and 225 in Mixed-Effects Models in S and S-PLUS, by Pinhiro and Bates. Could it that this script doesn't work for R?, see below (in yellow). Respons: Speed Fixed effects: Fuel, CarMod (1,2&3) Random effects: Place
> lme1 <- lme(Speed ~ Fuel*Car, random=~1|Place,data=test) > summary (lme1)
Linear mixed-effects model fit by REML
Data: test
AIC BIC logLik
261.2013 275.6996 -121.6007
Random effects:
Formula: ~1 | Place
(Intercept) Residual
StdDev: 0.0003238738 5.013858
Fixed effects: Speed ~ Fuel + Car + Driver + Fuel * Car
Value Std.Error DF t-value p-value
(Intercept) -29.33479 12.743084 30 -2.302017 0.0285
Fuel 10.04684 1.408789 30 7.131542 0.0000
CarMod2 46.55593 14.192029 7 3.280428 0.0135
CarMod3 1.65157 18.247158 7 0.090511 0.9304
Fuel:CarMod2 -5.53264 1.624159 30 -3.406464 0.0019
Fuel:CarMod3 -0.18452 2.010470 30 -0.091779 0.9275
Number of Observations: 44 Number of Groups: 10
> anova( lme1, L = c(Fuel:CarMod2 = 1, Fuel:CarMod3 = -1) )
Error: syntax error in "anova( lme1, L = c(Fuel:CarMod2="
The semicolon is not a valid character in an R name. Try quoting the names.
Regards R.S
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