[Rcpp-devel] Undefined Reference to typeinfo for Rcpp::RObject for Rdisop on Mac after Rcpp/RcppClassic update
Apparently this is moot now, because it looks like Rdisop now builds successfully on BioC for all systems: http://bioconductor.org/checkResults/2.14/bioc-LATEST/Rdisop/petty-buildsrc.html, http://bioconductor.org/checkResults/2.13/bioc-LATEST/Rdisop/perceval-buildsrc.html. Did you have to change something in your package, or was it related to the BioC build system? Thanks, Kevin
On Thu, Feb 6, 2014 at 10:41 AM, Kevin Ushey <kevinushey at gmail.com> wrote:
I wonder if the 'typeid' error could be a red herring and the real cause could be somehow related to virtual functions. If the compiler didn't know what 'typeid' meant (ie, had no RTTI) it would have failed on compilation, not linking, no? E.g.: http://stackoverflow.com/questions/307352/g-undefined-reference-to-typeinfo I'll try to see if I can figure something out. -Kevin On Thu, Feb 6, 2014 at 6:34 AM, Dirk Eddelbuettel <edd at debian.org> wrote:
On 6 February 2014 at 15:15, Steffen Neumann wrote: | Hi, | | On Thu, 2014-02-06 at 07:54 -0600, Dirk Eddelbuettel wrote: | ... | > Weird. If it is on the Mac, is that with g++-4.2 or with clang ? | ... | > | and llvm-g++-4.2 compiler. | | I don't know the terminology in llvm land, | the BioC system information page says "llvm-g++-4.2", | and there is more about the build environment on That's the old standard compiler that Simon still builds R with too. I would not know why it suddenly needs an RTTI switch. Dirk | > | http://bioconductor.org/checkResults/2.14/bioc-LATEST/petty-NodeInfo.html | | Did that help ? Otherwise we need input from Dan or Kevin. | | Yours, | Steffen | | | -- | IPB Halle AG Massenspektrometrie & Bioinformatik | Dr. Steffen Neumann http://www.IPB-Halle.DE | Weinberg 3 http://msbi.bic-gh.de | 06120 Halle Tel. +49 (0) 345 5582 - 1470 | +49 (0) 345 5582 - 0 | sneumann(at)IPB-Halle.DE Fax. +49 (0) 345 5582 - 1409 | -- Dirk Eddelbuettel | edd at debian.org | http://dirk.eddelbuettel.com
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