[Rcpp-devel] Error compiling Rcpp 0.10.4
Romain, Jonathan, an update on the error I reported: This was due to some gettext failure in the configuration of the R build on the Mac. I had to use the configure options --with-included-gettext and everything worked after installation. For a config.log if interested see here: https://gist.github.com/anonymous/6541684. Thanks again for your quick help! Best Simon
On Sep 12, 2013, at 5:54 PM, Simon Zehnder <szehnder at uni-bonn.de> wrote:
Romain, Jonathan, many thanks for the quick response. This is actually very good to know, that the -lintl is not in there usually. What I will do is to recompile my R from sources - but this time without the option --with-valgrind-instrumentation. Hopefully this is the source of error. Coming back to this later with hopefully some positive results. Best Simon On Sep 12, 2013, at 5:47 PM, Jonathan Olmsted <jolmsted at princeton.edu> wrote:
Any idea where that is coming from? It isn't coming from the Rcpp Makevars or from a default Macports installation (as best as I can tell). I just did an clean install of R from a clean Macports and then installed Rcpp from within R. g++ -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o Rcpp.so Date.o Module.o Rcpp_init.o Timer.o api.o attributes.o barrier.o exceptions.o -F/opt/local/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation g++ -o libRcpp.dylib Date.o Module.o Rcpp_init.o Timer.o api.o attributes.o barrier.o exceptions.o -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -F/opt/local/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation ar qc libRcpp.a Date.o Module.o Rcpp_init.o Timer.o api.o attributes.o barrier.o exceptions.o ------------------------------------------------------------------------- J.P. Olmsted 029 Corwin (Office) 130 Corwin Hall (Mail) Politics Department Princeton University Princeton, NJ 08544 t: 609.258.6202 f: 609.258.1110 jolmsted at princeton.edu http://about.me/olmjo ------------------------------------------------------------------------- On Thu, Sep 12, 2013 at 10:28 AM, Simon Zehnder <szehnder at uni-bonn.de> wrote: Dear Rcpp-Users and Rcpp-Devels, I had to reinstall my system lately and compiled R-3.0.1. I installed several packages and all installations went well. Then I tried to install Rcpp 0.10.4. and I got: R CMD INSTALL Rcpp * installing to library ?/Users/simonzehnder/Library/R/3.0/library? * installing *source* package ?Rcpp? ... ** package ?Rcpp? successfully unpacked and MD5 sums checked ** libs g++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I../inst/include/ -I/opt/local/include -fPIC -g -O2 -c Date.cpp -o Date.o g++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I../inst/include/ -I/opt/local/include -fPIC -g -O2 -c Module.cpp -o Module.o gcc -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I../inst/include/ -I/opt/local/include -fPIC -g -O2 -c Rcpp_init.c -o Rcpp_init.o g++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I../inst/include/ -I/opt/local/include -fPIC -g -O2 -c Timer.cpp -o Timer.o g++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I../inst/include/ -I/opt/local/include -fPIC -g -O2 -c api.cpp -o api.o g++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I../inst/include/ -I/opt/local/include -fPIC -g -O2 -c attributes.cpp -o attributes.o g++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I../inst/include/ -I/opt/local/include -fPIC -g -O2 -c barrier.cpp -o barrier.o g++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I../inst/include/ -I/opt/local/include -fPIC -g -O2 -c exceptions.cpp -o exceptions.o g++ -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/opt/local/lib -o Rcpp.so Date.o Module.o Rcpp_init.o Timer.o api.o attributes.o barrier.o exceptions.o -F/Library/Frameworks/R.framework/.. -framework R -lintl -Wl,-framework -Wl,CoreFoundation g++ -o libRcpp.dylib Date.o Module.o Rcpp_init.o Timer.o api.o attributes.o barrier.o exceptions.o -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -F/Library/Frameworks/R.framework/.. -framework R -lintl -Wl,-framework -Wl,CoreFoundation ld: library not found for -lintl collect2: error: ld returned 1 exit status make: *** [libRcpp] Error 1 ERROR: compilation failed for package ?Rcpp? * removing ?/Users/simonzehnder/Library/R/3.0/library/Rcpp? What is the intl library and what could be the error. My System: Mac OS X Mountain Lion 10.8.4, Macports gcc48 Compiler Best Simon
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