[Rcpp-devel] Forcing a shallow versus deep copy
On 11 July 2013 at 10:33, baptiste auguie wrote:
| Hi, | | That's great, thanks for considering this! | | Following this discussion, I went to browse through my code looking for wrap() | and as() statements that could benefit from a speed-up of memory reuse. Of | course I didn't find any.? | I switched to using Modules when they were introduced, the code being much | nicer to read, and these conversions only happen behind the scene. | My c++ functions thus only deal with native Armadillo / C++ objects, and I | leave it up to the modules to magically do the required conversions in and out. | It's a brilliant interface, very readable. | | From what I understand, however, the resulting code can often lose a factor 2-3 | in speed, compared to the now much more verbose alternative of explicitly | converting and sharing the memory with this type of code: No way. I have seen 2 to 3 __per cent__ which is very different from a factor 2 or 3. This whole discussion is mostly a non-issue, really, as best as I can tell because the cost ois really not that large. Dirk | arma::mat A(M.begin(), M.rows(), M.cols(), false); | | From this perspective, the possibility of setting copy_aux_mem to false?in as | (), as used by modules, would be very welcome. | | Best regards, | | baptiste | |
| On 11 July 2013 10:22, <romain at r-enthusiasts.com> wrote:
|
|
| Hello,
|
| This comes up every now and then, I think we can find a syntax to initiate
| an arma::mat that would allow what you want.
|
| It is not likely it will come via attributes. The idea is to keep them
| simple. The solutions I see below would eventually lead to clutter, and we
| are heading in the less clutter direction.
|
| I'll think about it and propose something.
|
| Romain
|
| Le 2013-07-11 14:32, Changi Han a ?crit?:
|
|
| Hello,
|
| I think I (superficially) understand the difference between:
|
| // [[Rcpp::export]]
| double sum1(Rcpp::NumericMatrix M) {
| ? ? arma::mat A(M.begin(), M.rows(), M.cols(), false);
| ?? ? return sum(sum(A));
| }
|
| // [[Rcpp::export]]
| double sum2(arma::mat A) {
| ? ? return sum(sum(A));
| }
|
| Partly out of laziness, partly because sum2 is more elegant, and
| partly to avoid namespace pollution, I was wondering if there is a way
| to "force" a "shallow" copy in sum2.
|
| If not, then may I submit a low priority feature request. An
| attribute? Some thing like:
|
| // [[Rcpp::export]]
| double sum2(arma::mat A) {
| ? ? // [[ Rcpp::shallow ( A ) ]]
| ?? ? return sum(sum(A));
| }
|
| Or (akin to C++11 generalized attributes)
|
| // [[Rcpp::export]] { [[ Rcpp::shallow ( A ) ]] }
| double sum2(arma::mat A) {
| ? ? return sum(sum(A));
| ?}
|
| An alternative is to have an argument in sourceCpp that takes a
| list/vector of objects that are to be shallow or deep copied.
|
| For example in sum1, if M is changed within the function before
| casting to the arma::mat, then might be cleaner to add M to a
| list/vector of objects to be deep copied rather than cloning M within
| sum1: leads to one fewer variable name.
|
| Just a thought. I can certainly live with the additional step. As
| always, thanks for all the Rcpp goodness.
|
| Cheers,
| Changi Han
|
|
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Dirk Eddelbuettel | edd at debian.org | http://dirk.eddelbuettel.com