On 29 January 2014 at 12:06, Dan Tenenbaum wrote:
| Yes, thanks. I took a look at https://github.com/kevinushey/RcppBiocChecks and it looks like Bioconductor packages are in good shape. Thanks Kevin for checking this, and Steffen for fixing mzR and Rdisop. | | That document does refer to several packages that are not Bioconductor packages: | | CDM | sirt | TAM | geiger Note the date. Kevin's page is a little dusty (~ 5 days). I am trying to keep https://github.com/RcppCore/rcpp-logs/blob/master/status/status-20140129.txt more current (which includes changing the url which may be bad style -- but I am keeping the url of all other files in that repo). CDM, sirt, and TAM are indeed on the list of the now 12 packages still needing a patch. The other one, geiger, morphed to works as-is with some other work. And Kevin also confirmed to me that the four CRAN packages I didn't touch (as they depended on BioC packages) also test fine -- so we are now in the clear for all of BioC. I still need to reflect that update from Kevin. But we're getting there -- and it is really excellent how folks are helping. Four patched packages are already on CRAN, plus three which got there late last week, plus the handful I was involved with, ... | Anyway, I don't think I need to take further action on this, but if anyone needs me to do or test anything, just let me know. Noted, thanks. Dirk
Dirk Eddelbuettel | edd at debian.org | http://dirk.eddelbuettel.com