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40 results for “from:Arman Shahrisa”

[Bioc-devel] Java version issue on Bioconductor test platform
Arman Shahrisa · Sep 2, 2020 · bioc-devel

Hi Herve, The last response in the previous topic suggested that the maintainer has already fixed the problem on GitHub but not CRAN. https://stat.ethz.ch/pipermail/bioc-devel/2020-May/016791.html This is from May and the...

[Bioc-devel] How can I print a message on console with library("myPackage")?
Arman Shahrisa · Apr 24, 2019 · bioc-devel

Thank you very much for your kind help. That fixed my issue. Best regards, Arman ________________________________ From: Shepherd, Lori <Lori.Shepherd at RoswellPark.org> Sent: Wednesday, April 24, 2019 9:59:40 PM To: Arman Shahrisa; Martin Morgan; bioc-devel; szwjf08...

[Bioc-devel] How can I print a message on console with library("myPackage")?
Arman Shahrisa · Apr 24, 2019 · bioc-devel

I really appreciate your kind answers. I created the zzz.R file in the same folder as the rest of my R files. I tried both .onAttach and .onLoad functions as follow: > .onAttach <- function(libname, pkgname){ > packageStartupMessage("Please send bug...

[Bioc-devel] How can I remove limit of row numbers that can be printed on console?
Arman Shahrisa · Sep 8, 2017 · bioc-devel

Thank you very much for proposing your solution. Unfortunately, it didn?t work. I don?t know why. By another solution worked for me. Best regards, Arman From: Herv? Pag?s<mailto:hpages at fredhutch.org> Sent: Friday, September 8...

[Bioc-devel] Rstudio returns fail for package check
Arman Shahrisa · Oct 1, 2018 · bioc-devel

Hi Felix, Thank you very much for mentioning that. As you have guessed, I?m on windows. Installing the version 6.0.1 should fix the issue. Thanks again. Sincerely, Arman From: Felix Ernst<mailto:felix.ernst at ulb.ac...

[Bioc-devel] FW: Repetitive variables within multiple function
Arman Shahrisa · Dec 31, 2019 · bioc-devel

Thank you very much for your response. I really appreciate it. How can I define those vectors in my package? Another R script that possesses only all the vectors? Which also needs documentation. Am I correct? Best regards, Arman From...

[Bioc-devel] FW: Java version issue on Bioconductor test platform
Arman Shahrisa · Sep 12, 2020 · bioc-devel

Dear Herve, Thank you very much for recommending the openxlsx package. It looks like that it also supports multiple sheets per file. I?ll try replacing xlsx with openxlsx package for all platforms. Best regards, Arman From: Pages, Herve<mailto...

[Bioc-devel] How can I remove limit of row numbers that can be printed on console?
Arman Shahrisa · Sep 8, 2017 · bioc-devel

Sorry, I didn?t think of that. I only added the lines to make my request clear. Regards, Arman From: Lucas Schiffer<mailto:schiffer.lucas at gmail.com> Sent: Saturday, September 9, 2017 00:35 To: Arman Shahrisa<mailto:shahrisa...

[Bioc-devel] Confusion with how to maintain release/devel files on local computer.
Arman Shahrisa · Nov 1, 2017 · bioc-devel

I cloned the package into a clean directory. Then I followed ?New package workflow? strategy. By checking Description file while switching between branches, I can easily see the version change which is correct. If I understand it correctly, GitHub can...

[Bioc-devel] FW: Java version issue on Bioconductor test platform
Arman Shahrisa · Sep 9, 2020 · bioc-devel

Hi to all, I have sent several emails to the maintainer of ?xlsx? package but unfortunately, he is unresponsive. Am I allowed to use an alternative package for exporting data only for mac users? Best regards, Arman From: Arman Shahrisa...

[Bioc-devel] Confusion with how to maintain release/devel files on local computer.
Arman Shahrisa · Nov 2, 2017 · bioc-devel

> There is no branch releas_3_6. >> I don't know what 'it' is -- I guess your local repository that you >> cloned, but where did you clone it from? I repeated all the process again. I opened git bash as...

[Bioc-devel] NEWS file hasn't been updated in the devel branch of package cbaf
Arman Shahrisa · Nov 16, 2017 · bioc-devel

Hi Herv?, I can still see the old NEWS file over there. Maybe you have mistakenly opened the stable branch (which is up to date and has no problem). My problem is with the devel branch. Even the NEWS file...

[Bioc-devel] How can I remove limit of row numbers that can be printed on console?
Arman Shahrisa · Sep 8, 2017 · bioc-devel

I mean is it correct approach to use put View(x) inside my function code, so that upon finishing, the results be shown automatically by View() and also stored as an excel file simultaneously? I can add a function argument...

[Bioc-devel] Confusion with how to maintain release/devel files on local computer.
Arman Shahrisa · Nov 1, 2017 · bioc-devel

I found how I can create another remote with GitHub using Rstudio. How can I merge master and GitHub? Best regards, Arman From: Arman Shahrisa<mailto:shahrisa.arman at hotmail.com> Sent: Thursday, November 2, 2017 03:23 To: Stephanie...

[Bioc-devel] Confusion with how to maintain release/devel files on local computer.
Arman Shahrisa · Nov 3, 2017 · bioc-devel

Thank you very much for all your assistance. Unfortunately, git bash must be run as administrator, otherwise user won?t be able to change the pwd from partition C to another partition (It will remain in the previous directory on...

[Bioc-devel] Is version 1.1.0 correct for a new released package?
Arman Shahrisa · Nov 1, 2017 · bioc-devel

Thanks for your thorough answer. So, when I?m going to push the first devel change, the version must be 1.1.1 while bug fixes for the released package will start from 1.0.1. Am I right? Best...

[Bioc-devel] NEWS file hasn't been updated in the devel branch of package cbaf
Arman Shahrisa · Nov 16, 2017 · bioc-devel

It wasn?t changed when I sent the previous email. But after 1 hour, I noticed the change. The package was updated at Bioconductor website yesterday. It is not common for a single file to be corrected automatically after more...

[Bioc-devel] How can I remove limit of row numbers that can be printed on console?
Arman Shahrisa · Sep 8, 2017 · bioc-devel

Thank you very much for helping. I have a package in Bioconductor submission procedure. One of package functions shows the available cancer studies, allowing the user to choose from them. I have two options: Saving the output to the package...

[Bioc-devel] Confusion with how to maintain release/devel files on local computer.
Arman Shahrisa · Nov 2, 2017 · bioc-devel

I can see two branches master and releas_3_6. I created GMaster to connect it with GitHub. But as far as it looks like, it?s only a local directory. Also, I don?t know weather I can remove...

[Bioc-devel] How much does it takes for a package to appear at Bioconductor.org after a push?
Arman Shahrisa · Nov 13, 2017 · bioc-devel

I apologize. It was better to mention the package name. Thank you very Much for your assistance. The devel branch of cbaf has the version of 1.1.1 . The error happened for Windows and Linux check is caused by...

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