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On 21/01/11 17:02 PM, "Martin Unterseher" <martin.unterseher at uni-greifswald.de> wrote: > \begin{figure} > <<fig=true>>= > pool.test<-poolaccum(test) > plot(pool.test) > @ > \end{figure} Martin, You should set echo=false in Sweave so that your...
On Tue, 2004-11-23 at 17:40, roger koenker wrote: > Having just finished an index I would like to second John's comments. > Even as an author, it is difficult to achieve some degree of > completeness and consistency. > > Of...
On 20/12/2013, at 10:15 AM, Mahnaz Rabbaniha wrote: > Dear all > > I have done cca in vegan package, > > bio file are the zooplankton genus > m file is the hydro biological groups > > > vare.cca <- cca(bio,m) > >> plot(vare...
On 07/11/2013, at 09:35 AM, Renaud Gaujoux wrote: > I agree that the handling of \b is not that strange, once one agrees > on what \b actually means, i.e. "go back one character" and not > "delete previous...
esgarbanzo <jcram <at> uw.edu> writes: > > > Hello, > I've successfully run my CCA and the ordination is not displayed quite > right. Is it possible to flip the x-axis (ie., make it a mirror image of > itself)? > Howdy, I don...
On 9 Nov 2004, at 19:44, Jonathan Baron wrote: > The RPM for Fedora Core 2 seems to work just fine on Core 3. > > (The graphics window got smaller, but I'm sure there is a setting > for that.) > That...
On Wed, 2004-12-08 at 17:01, Jari Oksanen wrote: > > I just wait for someone jumping off and saying this is off-topic and you > should stop posting to this list -- and I'm afraid it could happen just...
On Wed, 2004-12-08 at 17:01, Jari Oksanen wrote: > > I just wait for someone jumping off and saying this is off-topic and you > should stop posting to this list -- and I'm afraid it could happen just...
On 5 Jun 2005, at 16:47, Duncan Murdoch wrote: > Thanks for posting this; I think you raise good points, but they're > more appropriate for R-devel, so I've posted my reply there. > There are diverse opinions about...
Greg <chaoborid <at> gmail.com> writes: > > You could try 'vegdist()' in the 'vegan' package. > > Yep, you could. However, if you want to have Jaccard for binary data although your data are not binary, you must set binary = TRUE in vegan...
On Thu, 2006-06-15 at 07:13 +0300, Jari Oksanen wrote: > > > > 1) use nonmetric/gradient descent MDS which seems to > > allow missing data, or > > > Not the isoMDS function in MASS. if N(N-1) is a problem, then nonmetric...
On 19/05/11 20:20 PM, "Francisco Cabrera Rodriguez" <fffcccrrr at yahoo.com> wrote: > I would like > to perform a cluster analysis to data of presence absence. > Which distance > and group linkage methods are best? Francisco, Nobody knows. Honestly...
Full_Name: Jari Oksanen Version: 2.1.0 OS: Linux & MacOS X Submission from: (NULL) (130.231.102.145) isoMDS (MASS) drops names of points. The reason seems to be that R-2.1.0 abandoned names.dist that isoMDS...
On 19/06/2013, at 12:40 PM, Rainer M Krug wrote: > Hi > > I am completely new to OS X (linux user up to now)- so please excuse my > ignorance. > > What is the best way to install R on OS...
Kim Vanselow <Vanselow <at> gmx.de> writes: > > Dear r-helpers! > How can I integrate other distances (in the form of a dist object) into function metaMDS? The problem: > metaMDS needs the original data.frame for the calculation and only the...
On Mon, 2005-06-06 at 10:34 -0500, Ross Clement wrote: > Thanks to all for both the public and private answers on this topic. It > looks like from your answers that I'll have to wait for "Modern Applied...
On 8/03/11 17:05 PM, "Stephen LeDuc" <sdleduc at gmail.com> wrote: > Dear R listserve members, > > Does anyone have any thoughts or advice regarding using "metaMDS" versus > "isoMDS" functions for conducing NMDS in R? Is one clearly preferred...
Elaine Kuo <elaine.kuo.tw <at> gmail.com> writes: > > Hello, > > I am using betadiver (vegan) to calculate beta diversity. > However, an error message shows > > Error in ifelse(x > 0, 1, 0) : > (list) object cannot be coerced to type 'double' ...snip...
On 2/11/10 19:34 PM, "Wade Wall" <wade.wall at gmail.com> wrote: > Thanks all, > > That was exactly what I was looking for. > Wade, Fine if you found what you were looking for. Please note that vegan envfit...
Agnieszka, Package 'mvpart' is documented. In this case, ?rpart.object explains *where* in the rpart object is the membership vector. cheers, jari oksanen On Mon, 2005-08-08 at 16:02 +0200, astrzelczak at ps.pl wrote: > Hi, > > I'd...
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