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Hi, all, I want to conduct a meta-analysis using R on a bunch of articles. The outcomes are in percentage format and it is single group. I am wondering how could I use R to do this kind of...

I put bmp() before the plot() syntax , then the code worked. Bin Yue wrote: > > Dear all: > I hope that the file in which the picture is stored has the same name > as the " main" title of the picture . But it...

somewhere I read that " !is.na(your_vector)" is better than "your_vector!=NA" . Thomas L Jones, PhD wrote: > > Difficulty handling NA's: > Assume that I have a numeric vector y. For simplicity, assume that it has > 10 > elements. Assume...

Thanks for looking into it. I will try to get it work on the server. > On Jun 3, 2015, at 6:42 AM, Dirk Eddelbuettel <edd at debian.org> wrote: > > > It also works for me on Linux: > > R> sourceCpp("/tmp...

hi all, I have a binary data set and am now confronted with a "separation" issue. I have two predictors, mood (neutral and sad) and game type (fair and non-fair). By "separation", I mean that in the non-fair...

Dear List, I wonder if there is a way to convert a big matrix to ?float? instead of ?double? within a Rcpp program. The reason for using float is mainly for performance improvement. For instance, I have a simple function...

Hi Martin, That... seemed to have done the trick! No I didn't have it in before, not with the quotes on ".I". Thank you so much! Alice ________________________________ ???: Martin Morgan <mtmorgan.bioc at gmail.com> ????: 2021?2?16? 17:00...

dear List: glm(a~b+c,family=binomial,data=x)->fit deviance(fit) returns the same as the residual deviance. I don't not know much about logistic regression.Some book tells that: " Deviance (likelihood ratio statistic): Deviance = -2log( likelihoodof...

Dear all: I am confounded by the "deviance" and the "change in deviance" of a logistic regression ? I have a object like this: summary(glm1) Call: glm(formula = status ~ no.filter + light.filter_2, family = binomial, data = re) Deviance Residuals...

A new error showed up: logical subscript contains NAs *--* *Yue (Jason) Zhao* PhD Candidate, Bioinformatics Program Boston University yuezh at bu.edu On Sat, Mar 23, 2019 at 11:22 AM Michael Lawrence via Bioc-devel < bioc-devel at r...

Thanks Simon. The warning is gone. Instead, it now crashed every time I do this: cairo_ps("~/Desktop/test.eps?) plot(1:10,1:10) I also noticed that the latest XQuartz 2.7.7 (incl. beta) was released in...

Got it. Thank you so much Dirk! Yue > On May 4, 2017, at 10:33 AM, Dirk Eddelbuettel <edd at debian.org> wrote: > > > On 4 May 2017 at 10:16, Yue Li wrote: > | Dear List, > | > | This is probably a dumb...

Dear List, I?m new to openmp and wonder if anyone know how to add -fopenmp to clang++ such that it can compile successfully without error using sourceCpp. Using the dmvnorm_arma as example (http://gallery.rcpp.org/articles/dmvnorm...

Dear List, I?m having an issue with compiling Rcpp code using ?fmat? matrix type on the server (Linux distro: CentOS release 5.11 (Final)) and wondering if someone has a quick fix. Basically, the following code works fine on...

Dear List, I wonder if anyone could share their Rcpp code for an equivalence of rWishart. I?ve come across a similar question in the forum: http://stackoverflow.com/questions/23463852/generate-wishart-distribution-using-rwishart-within-rcpp <http://stackoverflow...

Hey I just got feedback from CRAN auto-checking and find a wired thing package brainKCCA_0.1.0.tar.gz does not pass the incoming checks automatically, please see the following pre-tests: Windows: <https://win-builder.r-project...

Exactly what I needed. Thanks a lot! > On May 8, 2015, at 1:04 PM, Balamuta, James Joseph <balamut2 at illinois.edu> wrote: > > For OS X install instructions see: > > http://www.thecoatlessprofessor.com/programming/rcpp-rcpparmadillo-and-os-x-mavericks...

Sorry never mind. Somehow it starts working properly now after a reboot. Thanks! > On Oct 21, 2014, at 6:40 PM, Yue Li <gorillayue at gmail.com> wrote: > > Thanks Simon. The warning is gone. Instead, it now crashed every time...

Hi Lori, Thanks for the previous update, but the same error shows up again today, would you please check the Cairo in the Windows server? Thank you! PS. the error message: http://bioconductor.org/checkResults/release/bioc-LATEST/animalcules/tokay1...

Thank you Dirk and Yixuan! Indeed, '-Wno-deprecated-declarations? suppresses the warning. Best, Yue > On Apr 21, 2016, at 4:26 PM, Dirk Eddelbuettel <edd at debian.org> wrote: > > > On 21 April 2016 at 15:58, Yixuan Qiu wrote: > | It...