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We discovered an issue this morning that may be preventing pushes to git.bioconductor.org for data experiment, workflows, and books. We are aware of the issue and are working as fast as we can to restore access. We appreciate...

We are excited to have extended the browser API for ExperimentHub and AnnotationHub to allow more resource queries outside of R. This is a work in progress and we hope to improve efficiency, speed, and organization over the next few...

Over the next few days we will be making more updates to the new package submission tracker. If you currently have a package in review or are planning to submit one, there may be intermittent periods of disruption/unavailability. We...

Is there any update on when R 3.6.3 will be available for download from https://cloud.r-project.org/bin/macosx/ ? It seems like there was a release of R 3.6.3 for linux and windows on...

The Bioconductor Team is continuing to identify packages that will be deprecated in the next release to allow for the Bioconductor community to respond accordingly. The list will be updated monthly. The current list of deprecated packages is as follows...

Hello everyone, We are implementing some changes to how the documents are displayed on the landing pages. Any vignette/documentation that is currently in HTML format is unavailable temporarily until after the next daily build report posts. All the HTML...

The core team needs to run some updates on the git.bioconductor.org server location. This should only take a few minutes but during the update, access to push/pull from git.bioconductor.org will not be possible. We plan...

Hello, We will be performing some updates on the single package builder for new submissions today June 30. There will be a period of downtime while we run the updates. During this time packages on the tracker will not receive...

We will be updating the Single Package Builder for new package submissions this morning. While the updates are occurring there will be a temporary downtime for submitting new packages and receiving the automatically generated build reports for existing submissions. We...

We will be updating the single package builder for new package submissions to run on the devel version of Bioconductor (3.19) and R (4.4). During the update period there may be periods of intermittent downtime where build on...

We will begin to update the single package builders used to build and check new package submission to R 3.5 Bioc 3.7 today. While this is occurring the single package builder will be off line and there will...

Hello, The workflow builder has been updated to use Bioconductor 3.6 in preparation for the release. Please monitor any workflows you may maintain and debug accordingly. Also, new workflows will now be submitted to Bioconductor in the form of...

Over the next few days, we will be transitioning the single package builder for new Bioconductor submissions to use Bioconductor 3.22 rather than 3.21 following the latest Bioconductor release on April 16. This may result in downtime to...

Over the next few days, we will be transitioning the single package builder for new Bioconductor submissions to use Bioconductor 3.20 rather than 3.19 following the latest Bioconductor release on May 1. This may result in downtime to...

Hello all, We are working on some updates to the Single package builder used for submitting new packages. This shouldn't affect any packages already in the submission queue only new incoming packages being submitted. The update should not take...

The experiment data build report from yesterday and the software build report for today will not be posted. There was an ERROR generating the builds stemming from the SSL certificate issues we were having. The issues have been remedied and...

Swagato Chatterjee <swagato1987 at gmail.com> writes: > Hello, > > I have written a R script which runs a regression of a dataset and saves > the result in a csv file. > > Now this dataset has to be edited periodically which is done...

There have been some updates to the builders and will require some additional updates to the single package builder. While this is occurring the single package builder for new package submissions will temporarily be down. We will notify when the...

The bioconductor dockers have been updated for the release. The release versions now utilize R 3.4.0 and Bioc 3.5 while the devel versions now utilize R 3.4.0 and Bioc 3.6. Older versions are available...

Hello all, Many have requested a page that helps identify common Bioconductor methods and classes that should try to be utilized in package development. We have created the following webpage in the developers resources section of the website and links...