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Hi everyone, How can I prevent the R from truncating the printed result on console? I have to print the output on console and I can?t use options(max.print = 10000) in my function. What else I can do...

Hi, how much does it take for a package to appear at Bioconductoe.org after pushing changes. I pushed changes after fixing a few bugs around 32 hours ago. But I still see the previous version of my package. Package...

Hi to all, I have started to apply fundamental changes to my package (cbaf). As a result, I think it is reasonable that the next stable release becomes version 2.0.0. The current version of my devel package is...

Hi, I?m the maintainer of package ?cbaf?. I have a code section that needs to be repeated several times in a function and another code section that is repeated in two other functions. I was thinking about creating a...

Hi to all, I?m maintainer of the package ?cbaf?. I have been monitoring reports for my package for months. I know there were some issues with mac server. However, it seems that error shown from mac server regarding my...

I?m the maintainer of package ?cbaf?. I use roxygen2 for documentation. If I want a message to be printed when the user loads my package with library(), what should I do? I also have another question. When I load...

Hi every one, I have a problem with my package check in Rstudio. I have no idea what might be causing the problem. I would be grateful if someone could help. ==> devtools::check() Updating cbaf documentation Loading cbaf Error in...

Hi, I?m the maintainer of package cbaf. The last version of cbaf in devel branch is available at bioconductor.org. However, due to an unknown reason, the NEWS file hasn?t been updated to the newest version (It is...

Hi, There are two GitHub commits for my package ?cbaf? by Bioconductor on 30 October. The interesting thing is the first commit changes version in description file from 0.99.8 to 1.0.0 while the second one changes...

Hi, I?m the maintainer of the package ?cbaf?. It?s a new package for bioc v 3.6. I?m trying to pull changes that are created during package publication. I?m doing according to https://bioconductor.org/developers...

Hi to all, I?m maintainer of the package ?cbaf?. I have pushed changes to both devel and stable branches almost two days ago. The package check has only been carried out for the stable release so far. There has...

Hi to all, I?m the maintainer of the package cbaf. The package relies on various terms to find the cancer studies that possess specific data e.g. RNA-Seq. These terms are used by three various functions. I was...

I?m confused with development process. At first, I need to have a folder with accepted packaged. Then I need to pull origion RELEASE_3_6? Then in another folder, I need to pull origion master? So that by opening...

Hi, I?m the maintainer of package cbaf. A week ago, I received an email from Bioconductor that devel branch of my package returns error. The problem occurred because a dependent package - cgdsr ? was deprecated. I have modified the package...

Hi to all, The devel version of my package -cbaf- seems to return error in Bioconductor website. On my PC, everything goes smoothly. I suspect that it might be caused by one of the dependent packages. I have tried to...

It looks like that the new version is gradually appearing. The first sign just appeared at citation section. It was waiting for me to send an e-mail! Best regards, Arman From: Arman Shahrisa<mailto:shahrisa.arman at hotmail.com...

Thank you for asking. It is a matrix. The following is a sample from cgdsr package and how it can be useful. The users then choose the desired studies from the list. It uses the printing approach. I can?t...

Hi, I?ve just checked landing pages for my package (cbaf). One of the missing badges has been fixed but still there is one missing badge. Best regards, Arman From: Shepherd, Lori<mailto:Lori.Shepherd at RoswellPark.org> Sent: Tuesday...

It sounds like an exciting opportunity. Unfortunately, the link that you have mentioned doesn?t work. I have tried both direct and VPN connections. Please check the link. Best regards, Arman Shahrisa From: Shepherd, Lori<mailto:Lori.Shepherd at RoswellPark...

Recently, I?m getting this warning. What is the cause? I have the package ?Matrix? installed. Sometimes I get an error for the package ?Matrix? during build. But today, it?s all about R CMD check. Sincerely, Arman ==> roxygen2::roxygenize...