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Dear Bioc developers, I have been developing different packages to analyze DNA methylation. In all of them, I have used minfi's class GenomicRatioSet to manage DNA methylation data, in order to take profit of the features of RangedSummarizedExperiment. Although...

Hi, It worked. Now I can make pushes. Thanks, Carlos El 14/09/2017 a las 20:23, Turaga, Nitesh escribi?: > Bioc-git server* (git.bioconductor.org). > > Ignore the typo. > >> On Sep 14, 2017, at 2:20 PM, ni41435_ca...

Hi Nitesh, I have checked my mail and I have 3 different SVN ids, one for each package I have submitted: - r.carlos: MEAL - c.ruiz-arenas: MultiDataSet - c.ruiz: scoreInvHap When I submitted MultiDataSet, I asked Bioc to consolidate...

Hi Bioc developers, A year ago, we introduced a class in my package MEAL to manage methylation data. After some Bioc releases, we realised that we don't really need this class and that it is better to reuse other...

Hi Lori, I made some changes to the MEAL vignettes and now MEAL successfully passes tests on Linux and Windows (build time: 1854 and 1613 seconds respectively). However, it still times out in OSX. Should I try to reduce the...

Hi everyone, I am the developer of MEAL package. In the previous release, I deprecated a function (multiCorrMethExprs). In this release, I marked this function as defuncted. I followed the instructions of Bioconductor's web page: I included the defunct...

Hi BiocDevel, Could you help me with this issue? The report is not very informative. I suspect that the vignettes are taking too long but I have two vignettes and I don't know which one is more problematic. I...