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Thanks for this clarification.
This also happens to ClassifyR.
After properly updating all my packages, there is no problem.
The example in the question was not inside a user function.
Now I understand how it works. What I needed was identical(gr1, gr2). Thanks, Dario.
Oh, thanks. I didn't see the most obvious package that still needed updating.
We could simply remove the GDL2GRL function once the GenomeData and GenomeDataList are defunct.
The cause of this was determined to be a bug in an outdated Apache server.
Good day, I see it, too. There's no problem. -------------------------------------- Dario Strbenac University of Sydney Camperdown NSW 2050 Australia
This has been re-sent to the Bioconductor Development mailing list and may be deleted from the archive if it is possible.
That is an adequate solution. It's always better if R package authors don't hard-code graphics parameters, though.
Good day, The log at http://bioconductor.org/developers/svnlog/ stopped updating two weeks ago. -------------------------------------- Dario Strbenac University of Sydney Camperdown NSW 2050 Australia
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Good day, In the development branch, all packages are only built on Linux. -------------------------------------- Dario Strbenac University of Sydney Camperdown NSW 2050 Australia
Good day, The problem is avoided by explicitly using bpstart and bpstop functions. -------------------------------------- Dario Strbenac PhD Student University of Sydney Camperdown NSW 2050 Australia
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Oh, good. That's just the use case I was thinking of using it for. Any plans for having an order method for them too ? - Dario.
Yes, I should be using range, now that I read about it. >try Machine$integer.max instead of Inf; but maybe you're looking for >range(GRanges(<...>)) > >Martin
Good day, No; anything older than the release branch at present is not modifiable. -------------------------------------- Dario Strbenac University of Sydney Camperdown NSW 2050 Australia
I am using the latest release version. I understand your recommendation about colData and will use it. -------------------------------------- Dario Strbenac PhD Student University of Sydney Camperdown NSW 2050 Australia
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