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Hello, I recently updated my bioconductor package via svn. The package was built successfully on my computer via R CMD build scde and passed R CMD check scde and R CMD BiocCheck scde. But the build report on Bioconductor ran...
Hi Kieran, It looks like your Travis build is failing because of your vignettes: Error: processing vignette 'contiBAIT.Rnw' failed with diagnostics: 6542 chunk 13 (label = orderAllLinkageGroupsExampleb) 6543Error in if (spearmanCor < 0) { : missing value where TRUE/FALSE needed 6544 6545...
Hi Martin, Ah, I didn?t realize the problems were connected. Yes, the vignettes do take quite a while to run. I?ll see what I can do. Thanks for the help. Best, Jean > On Jan 28, 2016, at 9...
Hi Yu, It looks like you?re using R Markdown v2 instead of R Markdown v1 so you will have to change your vignette engine. Your vignette likely contains %\VignetteEngine{knitr::knitr} You will need to change this to %\VignetteEngine...
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