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11 results for “from:Glyn Bradley”

[Bioc-devel] Package deprecation and reacceptance
Glyn Bradley · Sep 16, 2015 · bioc-devel

Hi All, Our package CausalR is currently broke due to the igraph updates. We're working on fixing it, but other commitments mean I'm really not sure when we'll get it done, and we've been told it...

[Bioc-devel] BiocCheck examples error when using imported package functions
Glyn Bradley · Jan 16, 2015 · bioc-devel

Hi, Our package uses igraph. We have imports: igraph in the DESCRIPTION file and import(igraph)in the NAMESPACE But when we try to write examples for our functions that use igraph functions to create then use igraph objects from...

[Bioc-devel] Rtools warning on tracker page
Glyn Bradley · Mar 24, 2015 · bioc-devel

Hi After uploading our package to the tracker, it built successfully on all systems with no errors. But we have the following Rtools related WARNING: WARNING: Rtools is required to build R packages, but no version of Rtools compatible with...

[Bioc-devel] Build OK in devel, Mac OS error in release (CausalR)
Glyn Bradley · Oct 26, 2016 · bioc-devel

Hi All, We currently have the same version of our package CausalR up in devel and release, but while devel is showing build OK for all 3 platforms, release is showing an build error for Mac OS. The error is...

[Bioc-devel] New package : CausalR
Glyn Bradley · May 18, 2015 · bioc-devel

Hi All, We're pleased to announce the release of our package 'CausalR', which provides functions for causal reasoning (causal network analysis). The idea is to explain sets of observed endpoints by reasoning through causal interaction networks, so for example...

[Bioc-devel] BiocCheck examples error when using imported package functions
Glyn Bradley · Jan 16, 2015 · bioc-devel

Hi Please disregard this thread, I've realised it's an error with our code Thanks Glyn From: Glyn Bradley Sent: 16 January 2015 15:32 To: 'bioc-devel at r-project.org' Subject: BiocCheck examples error when using imported...

[Bioc-devel] Updating CausalR package after igraph fix
Glyn Bradley · Jan 5, 2016 · bioc-devel

Hi All, Our package CausalR depends on igraph and so broke when igraph was updated last year. We have now fixed CausalR to work with the latest igraph, but we're not sure how we need to go about updating...

[Bioc-devel] Issues uploading our updated package (CausalR)
Glyn Bradley · Mar 16, 2016 · bioc-devel

Hi All, Our package, CausalR, broke when igraph was updated last year. We have now fixed this, but are having problems uploading the new version. The package had become depreciated in devel, but there's still a landing page in...

[Bioc-devel] changes to igraph break many Bioconductor packages (in release and devel)
Glyn Bradley · Jul 22, 2015 · bioc-devel

Hi All Is it acceptable to specify a particular version of igraph for our package to use, even as a temporary fix? Failing that, does anyone know of any way I can get R to tell me which functions in...

[Bioc-devel] Issues uploading our updated package (CausalR)
Glyn Bradley · Mar 16, 2016 · bioc-devel

Thanks, we?ve already read that. I was more hoping for a response from the Bioconductor team Glyn From: Kasper Daniel Hansen [mailto:kasperdanielhansen at gmail.com] Sent: 16 March 2016 13:20 To: Glyn Bradley Cc: bioc-devel at...

[Bioc-devel] Issues uploading our updated package (CausalR)
Glyn Bradley · Mar 22, 2016 · bioc-devel

Hi, We?ve got CausalR back up both in the 3.2 release and devel, but although we committed the same package (with different version number) to both release and devel, the landing pages are showing build:OK in release...

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