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Hi, I'm very much enjoying using the ape package to produce phylogenetic trees with colored branches (using edge.color). Is it also possible to specify that some branches should be drawn as dotted lines? That would be really useful...

Hi Elizabeth, I just found your thread after experiencing a similar problem (I was also using some IRanges/GenomicRanges functions). You've probably figured it out by this time - I'm actually curious to know what you found? I think...

Hi there, I'm trying to get some text in the outer margins of my plots and am having trouble - the margin text is overlapping my plots, even though the outer margin I'm trying to put it in is...

Hi, I've successfully updated our linux version of R to 2.9.0 but am having trouble on our solaris machine. I had previously installed 2.8.1 and earlier versions without trouble. I'm using R-patched_2009...

Hi, I am having trouble getting RMySQL running on a solaris machine. [43] bedrock:/home/jayoung/source_codes/R/other_packages> uname -a SunOS bedrock 5.10 Generic_118833-36 sun4v sparc SUNW,Sun-Fire-T200 I thought I had...

Hi, I found an architecture-specific segfault problem with the XML package. I originally found the problem using the parseKGML2Graph function in the Bioconductor KEGGgraph package, but as far as I can tell the underlying issue seems to be with...

Hi, Our sysadmin updated libxml2 to version 2.7.8, and now xmlTreeParse works fine with no segfault. Thank you very much - that was very helpful, Janet On Jun 8, 2011, at 11:59 AM, Janet Young wrote: > Dear Prof...

Dear Prof Ripley, Apologies - I've re-sent that to Duncan Temple Lang, along with your note about lib versions. Version info was included in my original post - I gave full sessionInfo(). It's XML_3.4-0. I only...

Hi, I'm struggling to install RCurl for 32-bit linux and am hoping for some suggestions. I obtained RCurl_1.3-1.tar.gz from CRAN today, and am using a very recent version of R: R version 2...

Hi, I'm having trouble compiling R-2.10.0 (R-patched_2009-11-02.tar.gz) on solaris 10 and am hoping for some advice. I'm getting errors about having the wrong version of lib_I_dbg_gen...

Hi again, My systems admin guy did come up with a fix after all: setenv PATH /opt/gcc/bin:/usr/bin:/sbin:/usr/sbin:/usr/sfw/bin:/opt/ sfw/bin:/usr/xpg4/bin:/usr/ccs/bin:/usr/local/bin:/opt...