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3 results for “from:Johannes Helmuth”

[Bioc-devel] Rhtslib 1.5.3 fails on install
Johannes Helmuth · Jul 12, 2016 · bioc-devel

Dear Bioconductor Developers, I use `Rhtslib` in two Bioconductor packages, namely `bamsignals` and `normr`. Apparently, the development version of `Rhtslib` (version 1.5.3) fails on install because automake is not available on the Bioconductor build system (see http://bioconductor...

[Bioc-devel] normr 0.99.5 Test Coverage "unknown"
Johannes Helmuth · Jul 12, 2016 · bioc-devel

Dear Bioconductor Developers, I recently contributed a package `normR` for calling enrichment and differences in ChIP-seq data (http://bioconductor.org/packages/normr/). To test the functionality of the package, I used `testthat`. All the tests run well when using...

[Bioc-devel] Linking to zlibbioc results in erroneous BUILD report
Johannes Helmuth · Jul 28, 2016 · bioc-devel

Dear Bioconductor Developers, The build of `Rhtslib` and `bamsignals` on moscato1 (Windows) is erroneous at stage "build" because of a missing `zlibbioc` dependency. Both packages link to `zlibbioc`: http://bioconductor.org/checkResults/devel/bioc-LATEST/Rhtslib/moscato1-buildsrc.html : Warning...

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