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8 results for “from:Kristian Ullrich”

[Bioc-devel] nebbiolo1 - build report
Kristian Ullrich · Apr 24, 2024 · bioc-devel

Hi, I just got an email from bbs: Hi MSA2dist maintainer, According to the Multiple platform build/check report for BioC 3.19, the MSA2dist package has the following problem(s): o ERROR for 'R CMD INSTALL' on nebbiolo1. See...

[Bioc-devel] Build issue on nebbiolo2 for DEWSeq
Kristian Ullrich · Nov 15, 2023 · bioc-devel

Dear Sudeep, Have you tried to use the R basic pipe "|>" instead of the magrittr pipe? If you use it directly in your R function you could add in the corresponding function the following line: @importFrom magrittr %>% Best regards Kristian...

[Bioc-devel] New BioC 3.21 settings for R 4.5.0
Kristian Ullrich · Nov 13, 2024 · bioc-devel

Hi Llu?s, Thank you for the nice code snippet to get these values. As mentioned earlier, if only the imports are counted in a non recursive manner, the threshold is fine. Best regards Kristian -- Dr. Kristian Ullrich, Dipl.-Bio...

[Bioc-devel] [EXTERNAL] Deeptarget package
Kristian Ullrich · Jul 8, 2024 · bioc-devel

Dear Trinh and Martin, thanks for the update and for the suggestions how to deal in such situation. Best regards Kristian -- Kristian Ullrich, Ph.D. Max Planck Institute For Evolutionary Biology Scientific IT group Department of Evolutionary Genetics August Thienemann...

[Bioc-devel] New BioC 3.21 settings for R 4.5.0
Kristian Ullrich · Nov 11, 2024 · bioc-devel

Dear Herv? and Jennifer, Thank you for clarification so quickly. Best regards Kristian -- Dr. Kristian Ullrich, Dipl.-Bio. Max Planck Institute For Evolutionary Biology Scientific IT group August Thienemann Str. 2 24306 Pl?n Germany +49 4522 763 313 ullrich...

[Bioc-devel] Deeptarget package
Kristian Ullrich · Jun 11, 2024 · bioc-devel

Dear Nguyen, I have a question related to the data that you use and I just bring it up here since I would also like to ask the bioconductor developers, how this can be handled properly. The depmap.org <http...

[Bioc-devel] New BioC 3.21 settings for R 4.5.0
Kristian Ullrich · Nov 11, 2024 · bioc-devel

Dear Jennifer, I do understand the reasoning behind the _R_CHECK_EXCESSIVE_IMPORTS_=20. However, the threshold needs to be discussed in my opinion. Given that a lot of bioconductor packages e.g. rely on the Biostrings and GenomicRanges package...

[Bioc-devel] [EXTERNAL] Deeptarget package
Kristian Ullrich · Jun 24, 2024 · bioc-devel

Dear Nguyen, Thank you for your response. I am just a bit puzzled, and no other developer has answered so far. E.g. in the description of the depmap package it says: "This data is distributed under the Creative Commons...

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