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51 results for “from:Marcelo Laia”

grofit issues with replicates - probit or logit or glmm
Marcelo Laia · Feb 16, 2015 · r-sig-ecology

Hi, I posted an question on R help a few days, bu, I do not got any help. Please, someone here have some ideia? http://article.gmane.org/gmane.comp.lang.r.general/317457 Thank you very much! Marcelo

Jaccard dissimilarity matrix for PCA
Marcelo Laia · Dec 28, 2010 · r-help

Flabbergaster <jlunding <at> gmail.com> writes: > My problem is, that I don't know how to compute the jaccard dissimilarity > matrix in R? Which package to use, and so on... http://rss.acs.unt.edu/Rdoc/library/arules/html/dissimilarity...

Fisheries acoustics
Marcelo Laia · Mar 10, 2004 · r-help

Hi, member-list i'm searching for packages or routines to analise fisheries acoustics data. Something make import data of scientific ecosound (EK500) of paralel port, filter signal, analyse pattern of pixel fish shoals... Is there someone work with this...

Tissue specific genes by ANOVA?
Marcelo Laia · Jul 14, 2008 · r-help

icebreake <Pascal_G <at> web.de> writes: > Hello, > > unfortunately I have I big problem I can't solve. (...) > Is there any possibility to do that? ANOVA? Duncan? Constrasts? > Hi Icebreake, Did you try maanova or limma package from www.bioconductor...

Book recomendation: Repeated Measurements
Marcelo Laia · Jul 14, 2013 · r-help

Dear, I need a book about repeated measurements analisys with R. In Amazon, I found this one: Models for Repeated Measurements (Oxford Statistical Science Series) J. K. Lindsey 1999 2ed. I would like a book with examples, data and R...

quantitative real time PCR
Marcelo Laia · Apr 10, 2008 · r-help

Hi, Please, I am looking for a way to analyze my qRT-PCR in my debian gnu linux and I found a package named qpcR on cran. Do you known another one that do this analysis (preferable a R addon...

Microsatellite analysis - Genetic Structure
Marcelo Laia · Mar 22, 2011 · r-sig-genetics

Hi, I would like to calculate genetic polymorphism for each population (mean number of alleles per locus (A), the percentage of polymorphic loci (P), the mean observed heterozygosity (HO) and the mean expected heterozygosity under Hardy-Weinberg equilibrium (HE)), and...

Word cloud based on a specific site
Marcelo Laia · Mar 29, 2021 · r-help

Hi, I would like to do a word cloud in a specif site related to a specific word. For example, I could be interested in discovery what are the words linked to word "tree" in a site like www.foo...

Export data from GeneMapper to TREMPR format
Marcelo Laia · Jan 6, 2017 · r-sig-ecology

Hi, I did an analysis in GeneMapper (T-RFLP) based on AFLP protocols, like ThermoFisher advise. I am in trouble to export de raw data. I need the dataset like TRAMPR need (https://dl.dropboxusercontent.com/u/34009642/demo_samples...

Export data from GeneMapper to TREMPR format
Marcelo Laia · Jan 6, 2017 · r-sig-genetics

Hi, I did an analysis in GeneMapper (T-RFLP) based on AFLP protocols, like ThermoFisher advise. I am in trouble to export de raw data. I need the dataset like TRAMPR need (https://dl.dropboxusercontent.com/u/34009642/demo_samples...

Tissue specific genes by ANOVA?
Marcelo Laia · Jul 14, 2008 · r-help

icebreake <Pascal_G <at> web.de> writes: > > > Thank's for the answer Marcelo. You are right, I'm working on microarrays > (Affymetrix). > I know the two packages you mentioned, but I have absolute know idea which > function I could use...

About kruskal.test
Marcelo Laia · Apr 15, 2003 · r-help

Hi, I'm newbie in R package, but i'm extremely gratefull for these list! is there possible to make kruskal.test summarize the sum of ranks?? e.g ##### z<-c(1.2,3.4,0,0,0,0,0...

setup multcompBoxplot
Marcelo Laia · Mar 26, 2013 · r-help

I did a multcompBoxplot like this: > xzx <-multcompBoxplot(DESC_COMP ~ CLONETRAT,data = data.cerato, + sortFn = "median", decreasing=TRUE, + horizontal=FALSE, compFn = "TukeyHSD", + plotList=list( + boxplot=list(fig=c(0, 0.75, 0, 1), + las=3, cex.axis=1.0), + multcompLetters...

error on install Rmpi packages
Marcelo Laia · Apr 8, 2005 · r-help

Dear Sir/Madam, I need to install Rmpi Package on my linux debian like, but I get some errors. I try to instal it using install.packages or after download and save it on my local dir and run R...

plot sub/super-script, formulas in boxplots
Marcelo Laia · May 21, 2006 · r-help

Hi, I try this one: boxplot(dados[,5]~dados$Trat, xaxt = "n", ylab = substitute(paste("mg de CO"[2],"/100 mL de MC"),list(x=""))) and I get this one in ylab: NA/100 mL de MC If I try...

Compare 4 comunity by similarity index
Marcelo Laia · May 28, 2015 · r-sig-ecology

Hello, I have four communities (site) in my project, like this: site specie quantity 1 A 100 1 B 1 1 C 23 1 D 56 2 A 0 2 B 110 2 C 3 2 D 6 3 A...

RGtk2 compilation problem
Marcelo Laia · Jan 6, 2011 · r-help

Shige Song <shigesong <at> gmail.com> writes: > > Dear All, > > I am trying to compile&install the package "RGtk2" on my Ubuntu 10.04 (...) > ./RGtk2/gdkClasses.h:4:23: error: RGtk2/gdk.h: No such file or directory Hi, In a...

Mortality anslisis
Marcelo Laia · Oct 7, 2008 · r-sig-ecology

Hi, I have searched in archives to looking for a library (or script, or method) for to evaluate a mortality analysis. I test different drugs (9 test, 1 positive control, and 1 negative) on 30 insects larvae (each ones larvae...

output gstat and maps
Marcelo Laia · Jan 13, 2004 · r-sig-geo

Hi, members I'm Marcelo, oceanographer from Brazil and actually work with fishery acoustical data of brazilian shelf. I'm using R, GMT, ArcView (windows) in Linux redhat 9.0 (Athlon Xp 1.6Ghz, 20Gb 540mb mem). I run kriging...

I receiv an error when try to run a function...
Marcelo Laia · Nov 12, 2003 · r-help

Hi All, I use R 1.8.0 and Bioconductor packages in Windows 2000 professional. When I try to run one function, I will receive one dialog box with this message: Rgui.exe has generate errors and will be closed...

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