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Hey everyone! In https://bioconductor.org/config.yaml <https://bioconductor.org/config.yaml>, r_version_associated_with_devel is "4.0.0", even though the devel version 3.13 requires R 4.1. Could you please update this? As I...

Dear all, I have access rights to modify a Bioconductor software package of mine, as per the information in https://git.bioconductor.org/BiocCredentials/ <https://git.bioconductor.org/BiocCredentials/> for the e-mail nunodanielagostinho at gmail.com <mailto:nunodanielagostinho at...

Good evening, I recently submitted a package to Bioconductor. Unfortunately, the Windows machine (moscato1) returned the following error while building the package: Error : package 'shiny' 0.13.2 was found, but >= 0.14 is required by 'psichomics' The issue related...

Dear all, I am the developer of cTRAP <https://github.com/nuno-agostinho/cTRAP>, a package that I recently submitted for approval to Bioconductor: https://github.com/Bioconductor/Contributions/issues/906 <https://github.com/Bioconductor/Contributions/issues/906>. The package...

Dear all, I am sorry if this question is basic but I did not find the answer online nor in Bioconductor forums. One of the authors of my package (https://bioconductor.org/packages/3.5/bioc/html/psichomics.html <https...

Hey all, I have a Bioconductor package named psichomics <https://bioconductor.org/packages/psichomics> that is timing out according to the Bioconductor R CMD build reports for Windows (both release and devel versions). This time out occurs after ~40 minutes...

Hey Alan, I think the line "container: almurphy/scfdev:latest" should be removed, this should only be used if you want to run something within a container (in this case, you just want to create a container). Also, you are...

Hey Steffen, Thank you for the instructions! I did not notice that field. Best regards, Nuno > On 23 Oct 2016, at 18:54, Steffen Neumann <sneumann at ipb-halle.de> wrote: > > Hi, > > you should enable utf8 encoding, see below. > > Yours...

Hey Alan, > I would like to automatically create a new image and push to dockerhub with github actions when I push changes to the github repository. Does anyone have an example of this process in their repositories? Well, I use...

Hey Alan, > is that installing the master branch or the current branch that has been pushed to? It is based on the current branch. > Building image [***/scfdev:combiz/scFlow:0.7.1 ***/scfdev:dev-am ***/scfdev:sha-658a6af] > invalid argument...

Hey Lori, I cloned the package from GitHub and I run R CMD build, resulting in an tar.gz file. I also tried to run R CMD check on this file, yet it printed the following error: * using R version...

Hi Herv?, Many thanks for your help! I modified plotSplicingEvent() to run differently in non-interactive R sessions. Now, it correctly prints the output in the vignette without opening the browser! Still, I find it weird that this issue is...