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Hi Bioconductor team, I noticed that the posts present in the Bioconductor Forum associated with each Bioc package are not accessible from the package website itself. Taking the popular DESeq2 package as an example, if you click on the "posts...
Hi all, I'm guessing what's the rationale behind this: > subsettingFun <- function(vec, ix) vec[ix] > subsettingFun(letters, c(1,2,5)) [1] "a" "b" "e" > subsettingFun(letters) [1] "a" "b" "c" "d" "e" "f" "g" "h" "i" "j...
Hi All, I have a question relative to the privileges that we have as developers on the Bioc server. Apart from the folders where the actual release and devel versions of our packages are, do we have access to some...
Dear Bioc community, As the previous email described, we're facing issues in reproducing the TIMEOUT during the build of the INSPEcT package in the Windows environment. Does anyone have suggestions on how to reproduce the tokay2 testing environment? For...
HI, We solved a similar issue for the INSPEcT package avoiding the parallelization in the computation of examples and vignettes. In our case it caused the timeout in the Windows environment. Best, Stefano Il giorno ven 17 apr 2020 alle...
Thanks Bill, This is more clear. In any case, I find very inappropriate that a programming language tries to guess the value of a missing argument. It is unfair towards code developers and it promotes the production of bugged piece...
Dear R developers, I noticed a bug in the stats4 package, specifically in the confint method applied to ?mle? objects. In particular, when some ?fixed? parameters define the log likelihood, these parameters are stored within the mle object but they...
Hi Petr, Thank you for your answer. I'm not sure how the empty index reflects what I'm showing in my example. If my function was emptySubset <- function(vec) vec[] I would then agree that this was the case...
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