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8 results for “from:Zhezhen Wang”

[Bioc-devel] RGL warning
Zhezhen Wang · Sep 10, 2019 · bioc-devel

Hi I am having the following warnings and not sure what to update. Warning in rgl.init(initValue, onlyNULL) : RGL: GLX extension missing on server Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE The package github link is here...

[Bioc-devel] BiocCheck error
Zhezhen Wang · Aug 20, 2019 · bioc-devel

Hi I am running BiocCheck on my new package and I get the following error message * Checking for deprecated package usage... Warning in readLines(file, skipNul = TRUE) : InternetOpenUrl failed: 'The server name or address could not be resolved' Error in...

[Bioc-devel] RGL warning
Zhezhen Wang · Sep 11, 2019 · bioc-devel

Thanks, do we need to solve all the warnings? Zhezhen ________________________________ From: Kasper Daniel Hansen <kasperdanielhansen at gmail.com> Sent: Wednesday, September 11, 2019 8:12 AM To: Zhezhen Wang <zhezhen at uchicago.edu> Cc: bioc-devel at r-project.org...

[Bioc-devel] Error in .get_entry_index(name, stop_if_missing)
Zhezhen Wang · Sep 10, 2019 · bioc-devel

Hi I had the following error while checking the package https://github.com/xyang2uchicago/BioTIP > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: getCluster_methods > ### Title: Clustering Network Nodes > ### Aliases: getCluster_methods > > ### ** Examples > > test = list('state1' = matrix(sample(1:10...

[Bioc-devel] BiocCheck error
Zhezhen Wang · Aug 20, 2019 · bioc-devel

The github repo is https://github.com/xyang2uchicago/NPS ________________________________ From: Vincent Carey <stvjc at channing.harvard.edu> Sent: Tuesday, August 20, 2019 10:52 AM To: Zhezhen Wang <zhezhen at uchicago.edu> Cc: bioc-devel at r-project.org <bioc...

[Bioc-devel] BiocCheck error
Zhezhen Wang · Aug 21, 2019 · bioc-devel

Thank you so much for that remainder. The thing is the NPS linkage is already included in our grant submission, but then we found that there already is a package called NPS so we decided to change it BioTIP. Is...

[Bioc-devel] BiocCheck error
Zhezhen Wang · Aug 20, 2019 · bioc-devel

I see, thank you Martin! Zhezhen ________________________________ From: Martin Morgan <mtmorgan.bioc at gmail.com> Sent: Tuesday, August 20, 2019 11:15 AM To: Zhezhen Wang <zhezhen at uchicago.edu>; Vincent Carey <stvjc at channing.harvard.edu> Cc: bioc-devel at...

[Bioc-devel] BiocCheck error
Zhezhen Wang · Aug 22, 2019 · bioc-devel

I see, thanks Herve and Martin! Zhezhen > On Aug 22, 2019, at 6:00 AM, Martin Morgan <mtmorgan.bioc at gmail.com> wrote: > > The requirement that the repository and package name be the same is something imposed by Biocondcutor during...

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