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Bioc-devel August 2011

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Are bioconductor packages designed for enrichment analysis affected by KEGG privatization ?

1 msg
Radhouane Aniba Are bioconductor packages designed for enrichment analysis affected by KEGG privatization ? Aug 3, 2011

GRangesList Drop All Element Metadata

2 msgs
Dario Strbenac GRangesList Drop All Element Metadata Aug 21, 2011 Michael Lawrence GRangesList Drop All Element Metadata Aug 22, 2011

GenomicFeatures on 2.13.1 Windows

4 msgs
Hervé Pagès GenomicFeatures on 2.13.1 Windows Aug 1, 2011 Dario Strbenac GenomicFeatures on 2.13.1 Windows Aug 1, 2011 Hervé Pagès GenomicFeatures on 2.13.1 Windows Aug 2, 2011 Dario Strbenac GenomicFeatures on 2.13.1 Windows Aug 3, 2011

HPC/Linux Systems Administrator Position

1 msg
Thomas Girke HPC/Linux Systems Administrator Position Aug 22, 2011

New version of rGADEM - ChIP-Seq de novo motif discovery

1 msg
Hervé Pagès New version of rGADEM - ChIP-Seq de novo motif discovery Aug 5, 2011

New version of rGADEM - ChIP-Seq de novo motif discovery

1 msg
Charles Joly New version of rGADEM - ChIP-Seq de novo motif discovery Aug 5, 2011

RSS feeds for new packages and svn commits

6 msgs
Dan Tenenbaum RSS feeds for new packages and svn commits Aug 24, 2011 Hervé Pagès RSS feeds for new packages and svn commits Aug 24, 2011 Sean Davis RSS feeds for new packages and svn commits Aug 24, 2011 Laurent Gatto RSS feeds for new packages and svn commits Aug 24, 2011 Dan Tenenbaum RSS feeds for new packages and svn commits Aug 24, 2011 Neumann, Steffen RSS feeds for new packages and svn commits Aug 24, 2011

Reduce Gap Width

3 msgs
Dario Strbenac Reduce Gap Width Aug 9, 2011 Martin Morgan Reduce Gap Width Aug 9, 2011 Dario Strbenac Reduce Gap Width Aug 9, 2011

Version not updated on bioconductor site

8 msgs
Tim Yates Version not updated on bioconductor site Aug 8, 2011 Vincent Carey Version not updated on bioconductor site Aug 8, 2011 Hervé Pagès Version not updated on bioconductor site Aug 8, 2011 Tim Yates Version not updated on bioconductor site Aug 9, 2011 Kasper Daniel Hansen Version not updated on bioconductor site Aug 9, 2011 Tim Yates Version not updated on bioconductor site Aug 9, 2011 Martin Morgan Version not updated on bioconductor site Aug 9, 2011 Tim Yates Version not updated on bioconductor site Aug 10, 2011

biocLite.R has been modified (BiocInstaller package)

2 msgs
Dan Tenenbaum biocLite.R has been modified (BiocInstaller package) Aug 20, 2011 Kasper Daniel Hansen biocLite.R has been modified (BiocInstaller package) Aug 26, 2011

isDisjoint Function Broken

3 msgs
Dario Strbenac isDisjoint Function Broken Aug 21, 2011 Hervé Pagès isDisjoint Function Broken Aug 21, 2011 Dario Strbenac isDisjoint Function Broken Aug 21, 2011

missing cn.farms package in build/check report

4 msgs
Andreas Mitterecker missing cn.farms package in build/check report Aug 9, 2011 Dan Tenenbaum missing cn.farms package in build/check report Aug 9, 2011 Andreas Mitterecker missing cn.farms package in build/check report Aug 9, 2011 Hervé Pagès missing cn.farms package in build/check report Aug 10, 2011

org.Mm.eg.db 2.5.0 appears broken

5 msgs
Paul Shannon org.Mm.eg.db 2.5.0 appears broken Aug 30, 2011 Dan Tenenbaum org.Mm.eg.db 2.5.0 appears broken Aug 30, 2011 Dan Tenenbaum org.Mm.eg.db 2.5.0 appears broken Aug 30, 2011 James W. MacDonald org.Mm.eg.db 2.5.0 appears broken Aug 31, 2011 Paul Shannon org.Mm.eg.db 2.5.0 appears broken Aug 31, 2011

question on annotations and data.frames

6 msgs
Andreas Heider question on annotations and data.frames Aug 23, 2011 Heidi Dvinge question on annotations and data.frames Aug 23, 2011 James W. MacDonald question on annotations and data.frames Aug 23, 2011 Andreas Heider question on annotations and data.frames Aug 24, 2011 Stefan McKinnon Høj-Edwards question on annotations and data.frames Aug 25, 2011 Andreas Heider question on annotations and data.frames Aug 25, 2011

seqnames missing in headerTabix()

4 msgs
Anita Lerch seqnames missing in headerTabix() Aug 23, 2011 Valerie Obenchain seqnames missing in headerTabix() Aug 23, 2011 Anita Lerch seqnames missing in headerTabix() Aug 24, 2011 Martin Morgan seqnames missing in headerTabix() Aug 24, 2011

unique, duplicated, order, etc... on a GRanges object

1 msg
Hervé Pagès unique, duplicated, order, etc... on a GRanges object Aug 17, 2011

using data() inside a package function

2 msgs
Stephanie M. Gogarten using data() inside a package function Aug 30, 2011 Martin Morgan using data() inside a package function Aug 30, 2011