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Bioc-devel March 2012

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[Bioc-devel] Packages available in the build system
1 msg
[Bioc-devel] Packages available in the build system
3 msgs
Dan Tenenbaum Packages available in the build system Mar 31, 2012
Nicolas Delhomme Packages available in the build system Mar 31, 2012
Henrik Bengtsson Packages available in the build system Mar 31, 2012
[Bioc-devel] Packages available in the build system
5 msgs
Nicolas Delhomme Packages available in the build system Mar 31, 2012
Michael Lawrence Packages available in the build system Mar 31, 2012
Nicolas Delhomme Packages available in the build system Mar 31, 2012
Michael Lawrence Packages available in the build system Mar 31, 2012
Nicolas Delhomme Packages available in the build system Mar 31, 2012
[Bioc-devel] BioC 2.10 branch created
1 msg
Dan Tenenbaum BioC 2.10 branch created Mar 30, 2012
[Bioc-devel] Important: Bioconductor 2.10 branch to be created today
1 msg
Dan Tenenbaum Important: Bioconductor 2.10 branch to be created today Mar 30, 2012
[Bioc-devel] Bugfixes for VariantAnnotation::write_vcf
2 msgs
Richard Pearson Bugfixes for VariantAnnotation::write_vcf Mar 29, 2012
Valerie Obenchain Bugfixes for VariantAnnotation::write_vcf Mar 29, 2012
[Bioc-devel] Can we get a rheMac2 BSgenome?
5 msgs
Steve Lianoglou Can we get a rheMac2 BSgenome? Mar 27, 2012
Steve Lianoglou Can we get a rheMac2 BSgenome? Mar 27, 2012
Hervé Pagès Can we get a rheMac2 BSgenome? Mar 28, 2012
Hervé Pagès Can we get a rheMac2 BSgenome? Mar 28, 2012
Steve Lianoglou Can we get a rheMac2 BSgenome? Mar 28, 2012
[Bioc-devel] build/check reports and the upcoming release: windows question
2 msgs
Dan Tenenbaum build/check reports and the upcoming release: windows question Mar 28, 2012
Dan Tenenbaum build/check reports and the upcoming release: windows question Mar 28, 2012
[Bioc-devel] build/check reports and the upcoming release: windows question
1 msg
Leo Lahti build/check reports and the upcoming release: windows question Mar 28, 2012
[Bioc-devel] GenomicRanges 1.7.40
4 msgs
Hahne, Florian GenomicRanges 1.7.40 Mar 26, 2012
Steve Lianoglou GenomicRanges 1.7.40 Mar 26, 2012
Martin Morgan GenomicRanges 1.7.40 Mar 26, 2012
Hervé Pagès GenomicRanges 1.7.40 Mar 26, 2012
[Bioc-devel] Preparing package release notes - deadline Friday, March 30
1 msg
Dan Tenenbaum Preparing package release notes - deadline Friday, March 30 Mar 24, 2012
[Bioc-devel] General questions about package hosting on Bioconductor
3 msgs
John Dawson General questions about package hosting on Bioconductor Mar 22, 2012
Benilton Carvalho General questions about package hosting on Bioconductor Mar 22, 2012
Dan Tenenbaum General questions about package hosting on Bioconductor Mar 22, 2012
[Bioc-devel] Avoiding pkgs in Depends
3 msgs
Benilton Carvalho Avoiding pkgs in Depends Mar 21, 2012
Vincent Carey Avoiding pkgs in Depends Mar 21, 2012
Hervé Pagès Avoiding pkgs in Depends Mar 21, 2012
[Bioc-devel] Meta data access with $ for GRanges vs RangedData vs data.frame
15 msgs
Tim Yates Meta data access with $ for GRanges vs RangedData vs data.frame Mar 19, 2012
Tim Yates Meta data access with $ for GRanges vs RangedData vs data.frame Mar 19, 2012
Stefano Berri installing devel pre-compiled binary for MacOSX Mar 19, 2012
Steve Lianoglou Meta data access with $ for GRanges vs RangedData vs data.frame Mar 19, 2012
Steve Lianoglou installing devel pre-compiled binary for MacOSX Mar 19, 2012
Steve Lianoglou installing devel pre-compiled binary for MacOSX Mar 19, 2012
Tim Triche, Jr. Meta data access with $ for GRanges vs RangedData vs data.frame Mar 19, 2012
Tim Triche, Jr. Meta data access with $ for GRanges vs RangedData vs data.frame Mar 19, 2012
Steve Lianoglou Meta data access with $ for GRanges vs RangedData vs data.frame Mar 19, 2012
Hervé Pagès Meta data access with $ for GRanges vs RangedData vs data.frame Mar 19, 2012
Michael Lawrence Meta data access with $ for GRanges vs RangedData vs data.frame Mar 19, 2012
Hervé Pagès Meta data access with $ for GRanges vs RangedData vs data.frame Mar 19, 2012
Michael Lawrence Meta data access with $ for GRanges vs RangedData vs data.frame Mar 19, 2012
Hervé Pagès Meta data access with $ for GRanges vs RangedData vs data.frame Mar 19, 2012
Tim Triche, Jr. Meta data access with $ for GRanges vs RangedData vs data.frame Mar 20, 2012
[Bioc-devel] idempotent identifier mapping with GSEABase::mapIdentifiers()
7 msgs
Martin Morgan idempotent identifier mapping with GSEABase::mapIdentifiers() Mar 2, 2012
Robert Castelo idempotent identifier mapping with GSEABase::mapIdentifiers() Mar 5, 2012
Robert Castelo GSEABase::mapIdentifiers() stopped mapping identifiers Mar 14, 2012
Martin Morgan GSEABase::mapIdentifiers() stopped mapping identifiers Mar 14, 2012
Robert Castelo GSEABase::mapIdentifiers() stopped mapping identifiers Mar 15, 2012
Robert Castelo GSEABase::mapIdentifiers() stopped mapping identifiers Mar 20, 2012
Martin Morgan GSEABase::mapIdentifiers() stopped mapping identifiers Mar 20, 2012
[Bioc-devel] problem with images for html help IsoGeneGUI
2 msgs
Setia Pramana problem with images for html help IsoGeneGUI Mar 19, 2012
Martin Morgan problem with images for html help IsoGeneGUI Mar 19, 2012
[Bioc-devel] server down?
2 msgs
Dan Tenenbaum server down? Mar 19, 2012
Dan Tenenbaum server down? Mar 19, 2012
[Bioc-devel] Approaching deadlines: Warnings, BioC 2.9 builds to stop
1 msg
Dan Tenenbaum Approaching deadlines: Warnings, BioC 2.9 builds to stop Mar 19, 2012
[Bioc-devel] server down?
1 msg
Vincent Carey server down? Mar 19, 2012
[Bioc-devel] Res: Bioc-devel Digest, Vol 96, Issue 2Mc0
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jdanielnd at gmail.com Res: Bioc-devel Digest, Vol 96, Issue 2Mc0 Mar 17, 2012
[Bioc-devel] mapping between original and reduced ranges
18 msgs
Hahne, Florian mapping between original and reduced ranges Mar 14, 2012
Cook, Malcolm mapping between original and reduced ranges Mar 14, 2012
Kasper Daniel Hansen mapping between original and reduced ranges Mar 14, 2012
Hahne, Florian mapping between original and reduced ranges Mar 15, 2012
Kasper Daniel Hansen mapping between original and reduced ranges Mar 15, 2012
Hervé Pagès mapping between original and reduced ranges Mar 15, 2012
Cook, Malcolm mapping between original and reduced ranges Mar 15, 2012
Hervé Pagès mapping between original and reduced ranges Mar 15, 2012
Hervé Pagès mapping between original and reduced ranges Mar 15, 2012
Kasper Daniel Hansen mapping between original and reduced ranges Mar 15, 2012
Hervé Pagès mapping between original and reduced ranges Mar 15, 2012
Hahne, Florian mapping between original and reduced ranges Mar 15, 2012
Michael Lawrence mapping between original and reduced ranges Mar 15, 2012
Hahne, Florian mapping between original and reduced ranges Mar 15, 2012
Hervé Pagès mapping between original and reduced ranges Mar 15, 2012
Hahne, Florian mapping between original and reduced ranges Mar 16, 2012
Hervé Pagès mapping between original and reduced ranges Mar 16, 2012
Hahne, Florian mapping between original and reduced ranges Mar 17, 2012
[Bioc-devel] Alert to developers about changes to edgeR
2 msgs
Gordon K Smyth Alert to developers about changes to edgeR Mar 15, 2012
Nicolas Delhomme Alert to developers about changes to edgeR Mar 16, 2012
[Bioc-devel] Bug in DEXSeq, me thinks
6 msgs
Steve Lianoglou Bug in DEXSeq, me thinks Mar 12, 2012
Steve Lianoglou Bug in DEXSeq, me thinks Mar 13, 2012
Steve Lianoglou Bug in DEXSeq, me thinks Mar 13, 2012
Steve Lianoglou Bug in DEXSeq, me thinks Mar 13, 2012
Alejandro Reyes Bug in DEXSeq, me thinks Mar 14, 2012
Steve Lianoglou Bug in DEXSeq, me thinks Mar 14, 2012
[Bioc-devel] Reminder about BioC 2.10 release deadline - March 16 - packages pass build and check without errors
1 msg
Dan Tenenbaum Reminder about BioC 2.10 release deadline - March 16 - packages pass build and check without errors Mar 12, 2012
[Bioc-devel] biomaRt XML query "header" attribute
1 msg
Vince S. Buffalo biomaRt XML query "header" attribute Mar 9, 2012
[Bioc-devel] Candidates for BiocGenerics
19 msgs
Benilton Carvalho Candidates for BiocGenerics Mar 1, 2012
Sean Davis Candidates for BiocGenerics Mar 1, 2012
Kevin Coombes Candidates for BiocGenerics Mar 1, 2012
Hervé Pagès Candidates for BiocGenerics Mar 1, 2012
Benilton Carvalho Candidates for BiocGenerics Mar 1, 2012
Sean Davis Candidates for BiocGenerics Mar 1, 2012
Hervé Pagès Candidates for BiocGenerics Mar 1, 2012
Martin Morgan Candidates for BiocGenerics Mar 1, 2012
Nicolas Delhomme Candidates for BiocGenerics Mar 1, 2012
Hervé Pagès Candidates for BiocGenerics Mar 1, 2012
Hervé Pagès Candidates for BiocGenerics Mar 1, 2012
Nicolas Delhomme Candidates for BiocGenerics Mar 1, 2012
Hervé Pagès Candidates for BiocGenerics Mar 1, 2012
Hervé Pagès Candidates for BiocGenerics Mar 2, 2012
Nicolas Delhomme Candidates for BiocGenerics Mar 2, 2012
Benilton Carvalho Candidates for BiocGenerics Mar 5, 2012
Hervé Pagès Candidates for BiocGenerics Mar 6, 2012
Benilton Carvalho Candidates for BiocGenerics Mar 7, 2012
Hervé Pagès Candidates for BiocGenerics Mar 7, 2012
[Bioc-devel] BiocGenerics proposal
7 msgs
Steve Lianoglou BiocGenerics proposal Mar 5, 2012
Kasper Daniel Hansen BiocGenerics proposal Mar 5, 2012
Kevin Coombes BiocGenerics proposal Mar 5, 2012
Tim Triche, Jr. BiocGenerics proposal Mar 5, 2012
Hervé Pagès BiocGenerics proposal Mar 5, 2012
Steve Lianoglou BiocGenerics proposal Mar 5, 2012
Hervé Pagès BiocGenerics proposal Mar 5, 2012
[Bioc-devel] build schedule
5 msgs
Dan Tenenbaum build schedule Mar 5, 2012
Kasper Daniel Hansen build schedule Mar 5, 2012
Dan Tenenbaum build schedule Mar 5, 2012
Kasper Daniel Hansen build schedule Mar 5, 2012
Dan Tenenbaum build schedule Mar 5, 2012
[Bioc-devel] Bug fix for ShortRead package
2 msgs
Steve Lianoglou Bug fix for ShortRead package Mar 5, 2012
Martin Morgan Bug fix for ShortRead package Mar 5, 2012
[Bioc-devel] build schedule
1 msg
Kasper Daniel Hansen build schedule Mar 5, 2012
[Bioc-devel] Problem loading IRanges in devel version
1 msg
Dan Tenenbaum Problem loading IRanges in devel version Mar 2, 2012
[Bioc-devel] Problem loading IRanges in devel version
1 msg
Aedin Culhane Problem loading IRanges in devel version Mar 2, 2012