Bioc-devel - December 2014 - Thread View

[Bioc-devel] BiocCheck Error 'duplicate label install'?

1 msg Dec 31

Dan Tenenbaum BiocCheck Error 'duplicate label install'? Dec 31, 2014

[Bioc-devel] BiocCheck Error 'duplicate label install'?

1 msg Dec 31

Charles Determan Jr BiocCheck Error 'duplicate label install'? Dec 31, 2014

[Bioc-devel] [devteam-bioc] Use Imports instead of Depends in the DESCRIPTION files of bioconductor packages.

4 msgs Dec 31

Martin Morgan Use Imports instead of Depends in the DESCRIPTION files of bioconductor packages. Dec 31, 2014

Peng Yu Use Imports instead of Depends in the DESCRIPTION files of bioconductor packages. Dec 31, 2014

Michael Lawrence Use Imports instead of Depends in the DESCRIPTION files of bioconductor packages. Dec 31, 2014

Martin Morgan Use Imports instead of Depends in the DESCRIPTION files of bioconductor packages. Dec 31, 2014

[Bioc-devel] AnalysisPageServer: A framework for sharing interactive data and plots from R through the web.

1 msg Dec 21

Brad Friedman AnalysisPageServer: A framework for sharing interactive data and plots from R through the web. Dec 21, 2014

[Bioc-devel] Change of schema of ENSEMBL biomart

2 msgs Dec 18

Thomas Maurel Change of schema of ENSEMBL biomart Dec 18, 2014

Martin, Tiphaine Change of schema of ENSEMBL biomart Dec 18, 2014

[Bioc-devel] bamFlagAsBitMatrix error (?bug)

3 msgs Dec 14

Valerie Obenchain bamFlagAsBitMatrix error (?bug) Dec 14, 2014

Hervé Pagès bamFlagAsBitMatrix error (?bug) Dec 14, 2014

[Bioc-devel] bamFlagAsBitMatrix error (?bug)

1 msg Dec 14

Sean Davis bamFlagAsBitMatrix error (?bug) Dec 14, 2014

[Bioc-devel] Error when reading BAM files with readGAlignmentPairs

2 msgs Dec 12

Hervé Pagès Error when reading BAM files with readGAlignmentPairs Dec 12, 2014

Leonard Goldstein Error when reading BAM files with readGAlignmentPairs Dec 12, 2014

[Bioc-devel] Error when reading BAM files with readGAlignmentPairs

1 msg Dec 12

Leonard Goldstein Error when reading BAM files with readGAlignmentPairs Dec 12, 2014

[Bioc-devel] biovizBase Installation rbind Problem

3 msgs Dec 11

Dario Strbenac biovizBase Installation rbind Problem Dec 11, 2014

Dan Tenenbaum biovizBase Installation rbind Problem Dec 11, 2014

[Bioc-devel] VariantAnnotation: VCF to VRanges with multiple INFO values

5 msgs Dec 11

Julian Gehring VariantAnnotation: VCF to VRanges with multiple INFO values Dec 3, 2014

Michael Lawrence VariantAnnotation: VCF to VRanges with multiple INFO values Dec 3, 2014

Valerie Obenchain VariantAnnotation: VCF to VRanges with multiple INFO values Dec 8, 2014

Julian Gehring VariantAnnotation: VCF to VRanges with multiple INFO values Dec 11, 2014

Valerie Obenchain VariantAnnotation: VCF to VRanges with multiple INFO values Dec 11, 2014

[Bioc-devel] Experiment Data biocViews updates

2 msgs Dec 11

Vincent Carey Experiment Data biocViews updates Dec 8, 2014

Arora, Sonali Experiment Data biocViews updates Dec 11, 2014

[Bioc-devel] post-doc position

1 msg Dec 10

Levi Waldron post-doc position Dec 10, 2014

[Bioc-devel] Google hangout on Wed December 10th for new package authors

4 msgs Dec 10

Marc Carlson Google hangout on Wed December 10th for new package authors Dec 2, 2014

Michael Lawrence Google hangout on Wed December 10th for new package authors Dec 5, 2014

Arora, Sonali Google hangout on Wed December 10th for new package authors Dec 9, 2014

Arora, Sonali Google hangout on Wed December 10th for new package authors Dec 10, 2014

[Bioc-devel] VariantAnnotation: Harmonize default readVcf params

7 msgs Dec 9

Michael Lawrence VariantAnnotation: Harmonize default readVcf params Dec 8, 2014

Valerie Obenchain VariantAnnotation: Harmonize default readVcf params Dec 8, 2014

Vincent Carey VariantAnnotation: Harmonize default readVcf params Dec 9, 2014

Michael Lawrence VariantAnnotation: Harmonize default readVcf params Dec 9, 2014

Julian Gehring VariantAnnotation: Harmonize default readVcf params Dec 9, 2014

Vincent Carey VariantAnnotation: Harmonize default readVcf params Dec 9, 2014

Michael Lawrence VariantAnnotation: Harmonize default readVcf params Dec 9, 2014

[Bioc-devel] VariantAnnotation: Same locus, multiple samples

2 msgs Dec 8

Michael Lawrence VariantAnnotation: Same locus, multiple samples Dec 8, 2014

Valerie Obenchain VariantAnnotation: Same locus, multiple samples Dec 8, 2014

[Bioc-devel] Fwd: Re: Experiment Data biocViews updates

1 msg Dec 8

Arora, Sonali Experiment Data biocViews updates Dec 8, 2014

[Bioc-devel] Experiment Data biocViews updated

1 msg Dec 8

Arora, Sonali Experiment Data biocViews updated Dec 8, 2014

[Bioc-devel] findOverlaps() news

3 msgs Dec 8

Hervé Pagès findOverlaps() news Dec 5, 2014

Michael Lawrence findOverlaps() news Dec 5, 2014

Steve Lianoglou findOverlaps() news Dec 8, 2014

[Bioc-devel] of interest to variant annotators?

1 msg Dec 8

Vincent Carey of interest to variant annotators? Dec 8, 2014

[Bioc-devel] Experiment Data biocViews updates

1 msg Dec 8

Vincent Carey Experiment Data biocViews updates Dec 8, 2014

[Bioc-devel] recalling methods

10 msgs Dec 6

Michael Love recalling methods Dec 4, 2014

Martin Morgan recalling methods Dec 4, 2014

Vincent Carey recalling methods Dec 4, 2014

Michael Lawrence recalling methods Dec 4, 2014

Michael Love recalling methods Dec 5, 2014

Michael Lawrence recalling methods Dec 5, 2014

Gabriel Becker recalling methods Dec 5, 2014

Michael Love recalling methods Dec 5, 2014

Wolfgang Huber recalling methods Dec 6, 2014

Michael Lawrence recalling methods Dec 6, 2014

[Bioc-devel] cummeRbund volcano plot different point size

2 msgs Dec 5

Ian Misner cummeRbund volcano plot different point size Dec 4, 2014

Leonardo Collado Torres cummeRbund volcano plot different point size Dec 5, 2014

[Bioc-devel] SummarizedExperiment vs ExpressionSet

2 msgs Dec 5

Martin Morgan SummarizedExperiment vs ExpressionSet Dec 1, 2014

Michael Lawrence SummarizedExperiment vs ExpressionSet Dec 5, 2014

[Bioc-devel] FW: GO offspring consistency

3 msgs Dec 5

Jelle.Goeman at radboudumc.nl GO offspring consistency Dec 2, 2014

Marc Carlson GO offspring consistency Dec 5, 2014

[Bioc-devel] VariantAnnotation: Same locus, multiple samples

2 msgs Dec 5

Julian Gehring VariantAnnotation: Same locus, multiple samples Dec 5, 2014

Michael Lawrence VariantAnnotation: Same locus, multiple samples Dec 5, 2014

[Bioc-devel] BSgenomeForge Error

1 msg Dec 5

Arshi Syed BSgenomeForge Error Dec 5, 2014

[Bioc-devel] bug in source control HOWTO

1 msg Dec 4

Dan Tenenbaum bug in source control HOWTO Dec 4, 2014

[Bioc-devel] bug in source control HOWTO

1 msg Dec 4

Stephanie M. Gogarten bug in source control HOWTO Dec 4, 2014

[Bioc-devel] VariantAnnotation: Harmonize default readVcf params

1 msg Dec 4

Julian Gehring VariantAnnotation: Harmonize default readVcf params Dec 4, 2014

[Bioc-devel] About Hg38 BSgenome

1 msg Dec 3

rcaloger About Hg38 BSgenome Dec 3, 2014

[Bioc-devel] RSS package feeds not updated

6 msgs Dec 3

Dan Tenenbaum RSS package feeds not updated Dec 2, 2014

Stephanie M. Gogarten RSS package feeds not updated Dec 2, 2014

Dan Tenenbaum RSS package feeds not updated Dec 2, 2014

Kevin Rue-Albrecht RSS package feeds not updated Dec 3, 2014

Dan Tenenbaum RSS package feeds not updated Dec 3, 2014

[Bioc-devel] BioC 3.0 CHECK ERROR

1 msg Dec 3

Andrzej Oleś BioC 3.0 CHECK ERROR Dec 3, 2014

[Bioc-devel] Google hangout on Wed December 10th for new package authors

1 msg Dec 2

Peter Hickey Google hangout on Wed December 10th for new package authors Dec 2, 2014

[Bioc-devel] About Hg38 BSgenome

6 msgs Dec 2

rcaloger About Hg38 BSgenome Dec 2, 2014

Julian Gehring About Hg38 BSgenome Dec 2, 2014

James W. MacDonald About Hg38 BSgenome Dec 2, 2014

Julian Gehring About Hg38 BSgenome Dec 2, 2014

Marc Carlson About Hg38 BSgenome Dec 2, 2014

[Bioc-devel] Info On Clipper release version!

1 msg Dec 2

Paolo Martini Info On Clipper release version! Dec 2, 2014

[Bioc-devel] Info On Clipper release version!

1 msg Dec 2

Dan Tenenbaum Info On Clipper release version! Dec 2, 2014

[Bioc-devel] Info On Clipper release version!

2 msgs Dec 2

Paolo Martini Info On Clipper release version! Dec 2, 2014

Martin Morgan Info On Clipper release version! Dec 2, 2014

[Bioc-devel] RSS package feeds not updated

1 msg Dec 2

Julian Gehring RSS package feeds not updated Dec 2, 2014

Bioc-devel December 2014