Bioc-devel July 2015

[Bioc-devel] BioConductor Resources

1 msg Jul 30

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Dan Tenenbaum BioConductor Resources Jul 30, 2015

[Bioc-devel] BioConductor Resources

1 msg Jul 30

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CHELSEA JU BioConductor Resources Jul 30, 2015

[Bioc-devel] BiocStyle and R markdown

6 msgs Jul 30

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Thomas Girke BiocStyle and R markdown Jul 29, 2015

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Kasper Daniel Hansen BiocStyle and R markdown Jul 30, 2015

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Jim Hester BiocStyle and R markdown Jul 30, 2015

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Kasper Daniel Hansen BiocStyle and R markdown Jul 30, 2015

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Dan Tenenbaum BiocStyle and R markdown Jul 30, 2015

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Dan Tenenbaum BiocStyle and R markdown Jul 30, 2015

[Bioc-devel] error using the DEXSeqDataSet function

4 msgs Jul 30

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Leonard Goldstein error using the DEXSeqDataSet function Jul 29, 2015

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Alejandro Reyes error using the DEXSeqDataSet function Jul 30, 2015

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Leonard Goldstein error using the DEXSeqDataSet function Jul 30, 2015

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Martin Morgan error using the DEXSeqDataSet function Jul 30, 2015

[Bioc-devel] BiocStyle and R markdown

2 msgs Jul 29

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Thomas Girke BiocStyle and R markdown Jul 29, 2015

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Kasper Daniel Hansen BiocStyle and R markdown Jul 29, 2015

[Bioc-devel] BiocStyle and R markdown

3 msgs Jul 29

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Thomas Girke BiocStyle and R markdown Jul 29, 2015

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Kasper Daniel Hansen BiocStyle and R markdown Jul 29, 2015

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Kasper Daniel Hansen BiocStyle and R markdown Jul 29, 2015

[Bioc-devel] Hunting for the subset generic definition?

2 msgs Jul 29

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Hervé Pagès Hunting for the subset generic definition? Jul 29, 2015

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Hervé Pagès Hunting for the subset generic definition? Jul 29, 2015

[Bioc-devel] Hunting for the subset generic definition?

2 msgs Jul 29

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Steve Lianoglou Hunting for the subset generic definition? Jul 29, 2015

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Ryan Hunting for the subset generic definition? Jul 29, 2015

[Bioc-devel] Make codetoolsBioC available on GitHub?

3 msgs Jul 24

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Henrik Bengtsson Make codetoolsBioC available on GitHub? Jul 24, 2015

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Jim Hester Make codetoolsBioC available on GitHub? Jul 24, 2015

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Henrik Bengtsson Make codetoolsBioC available on GitHub? Jul 24, 2015

[Bioc-devel] testing class and length of function args

1 msg Jul 23

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Michael Love testing class and length of function args Jul 23, 2015

[Bioc-devel] testing class and length of function args

2 msgs Jul 23

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Hervé Pagès testing class and length of function args Jul 23, 2015

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Martin Morgan testing class and length of function args Jul 23, 2015

[Bioc-devel] testing class and length of function args

4 msgs Jul 22

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Michael Love testing class and length of function args Jul 22, 2015

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Jim Hester testing class and length of function args Jul 22, 2015

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Valerie Obenchain testing class and length of function args Jul 22, 2015

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Jim Hester testing class and length of function args Jul 22, 2015

[Bioc-devel] changes to igraph break many Bioconductor packages (in release and devel)

2 msgs Jul 22

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Glyn Bradley changes to igraph break many Bioconductor packages (in release and devel) Jul 22, 2015

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Dan Tenenbaum changes to igraph break many Bioconductor packages (in release and devel) Jul 22, 2015

[Bioc-devel] Fwd: OmicsMarkeR problems reported by the "Build/check report" for BioC 3.1

4 msgs Jul 21

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Dan Tenenbaum OmicsMarkeR problems reported by the "Build/check report" for BioC 3.1 Jul 21, 2015

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Charles Determan OmicsMarkeR problems reported by the "Build/check report" for BioC 3.1 Jul 21, 2015

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Dan Tenenbaum OmicsMarkeR problems reported by the "Build/check report" for BioC 3.1 Jul 21, 2015

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Charles Determan OmicsMarkeR problems reported by the "Build/check report" for BioC 3.1 Jul 21, 2015

[Bioc-devel] Fwd: OmicsMarkeR problems reported by the "Build/check report" for BioC 3.1

1 msg Jul 21

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Charles Determan OmicsMarkeR problems reported by the "Build/check report" for BioC 3.1 Jul 21, 2015

[Bioc-devel] Bioc-devel Digest, Vol 136, Issue 20

1 msg Jul 20

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Ulrich Bodenhofer Bioc-devel Digest, Vol 136, Issue 20 Jul 20, 2015

[Bioc-devel] changes to igraph break many Bioconductor packages (in release and devel)

1 msg Jul 19

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Dan Tenenbaum changes to igraph break many Bioconductor packages (in release and devel) Jul 19, 2015

[Bioc-devel] VariantAnnotation: verbose output of readVcf

2 msgs Jul 17

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Valerie Obenchain VariantAnnotation: verbose output of readVcf Jul 16, 2015

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Julian Gehring VariantAnnotation: verbose output of readVcf Jul 17, 2015

[Bioc-devel] ggbio: gridExtra 2.0.0 breaks import

3 msgs Jul 17

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Dan Tenenbaum ggbio: gridExtra 2.0.0 breaks import Jul 16, 2015

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Tengfei Yin ggbio: gridExtra 2.0.0 breaks import Jul 16, 2015

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Julian Gehring ggbio: gridExtra 2.0.0 breaks import Jul 17, 2015

[Bioc-devel] Memory issues with BiocParallel::SnowParam()

9 msgs Jul 16

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Leonardo Collado Torres Memory issues with BiocParallel::SnowParam() Jul 9, 2015

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Vincent Carey Memory issues with BiocParallel::SnowParam() Jul 10, 2015

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Leonardo Collado Torres Memory issues with BiocParallel::SnowParam() Jul 10, 2015

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Valerie Obenchain Memory issues with BiocParallel::SnowParam() Jul 12, 2015

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Valerie Obenchain Memory issues with BiocParallel::SnowParam() Jul 12, 2015

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Leonardo Collado Torres Memory issues with BiocParallel::SnowParam() Jul 14, 2015

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Valerie Obenchain Memory issues with BiocParallel::SnowParam() Jul 15, 2015

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Valerie Obenchain Memory issues with BiocParallel::SnowParam() Jul 15, 2015

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Leonardo Collado Torres Memory issues with BiocParallel::SnowParam() Jul 16, 2015

[Bioc-devel] VariantAnnotation: verbose output of readVcf

1 msg Jul 16

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Julian Gehring VariantAnnotation: verbose output of readVcf Jul 16, 2015

[Bioc-devel] ggbio: gridExtra 2.0.0 breaks import

1 msg Jul 16

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Julian Gehring ggbio: gridExtra 2.0.0 breaks import Jul 16, 2015

[Bioc-devel] Bioconductor Git/GitHub Mirrors

3 msgs Jul 15

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Siddhartha Bagaria Bioconductor Git/GitHub Mirrors Jul 14, 2015

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Jim Hester Bioconductor Git/GitHub Mirrors Jul 15, 2015

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Siddhartha Bagaria Bioconductor Git/GitHub Mirrors Jul 15, 2015

[Bioc-devel] New package: rCGH

1 msg Jul 15

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COMMO Frederic New package: rCGH Jul 15, 2015

[Bioc-devel] Redirect workers output to STDERR, how to do so with current BiocParallel::SnowParam()?

3 msgs Jul 14

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Leonardo Collado Torres Redirect workers output to STDERR, how to do so with current BiocParallel::SnowParam()? Jul 14, 2015

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Valerie Obenchain Redirect workers output to STDERR, how to do so with current BiocParallel::SnowParam()? Jul 14, 2015

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Leonardo Collado Torres Redirect workers output to STDERR, how to do so with current BiocParallel::SnowParam()? Jul 14, 2015

[Bioc-devel] Short URLs for packages?

4 msgs Jul 8

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Vincent Carey Short URLs for packages? Jul 7, 2015

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Dan Tenenbaum Short URLs for packages? Jul 7, 2015

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Vincent Carey Short URLs for packages? Jul 7, 2015

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Dan Tenenbaum Short URLs for packages? Jul 8, 2015

[Bioc-devel] Bug in frmaTools

6 msgs Jul 8

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Ryan Bug in frmaTools Jul 6, 2015

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Ryan Bug in frmaTools Jul 6, 2015

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Matthew McCall Bug in frmaTools Jul 7, 2015

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Ryan Bug in frmaTools Jul 7, 2015

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Ryan Bug in frmaTools Jul 7, 2015

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Matthew McCall Bug in frmaTools Jul 8, 2015

[Bioc-devel] csaw - suggestions

2 msgs Jul 7

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Arne Müller csaw - suggestions Jul 7, 2015

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Sean Davis csaw - suggestions Jul 7, 2015

[Bioc-devel] Flagme creating vignettes ERROR

3 msgs Jul 7

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Dan Tenenbaum Flagme creating vignettes ERROR Jul 2, 2015

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Riccardo Romoli Flagme creating vignettes ERROR Jul 4, 2015

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Riccardo Romoli Flagme creating vignettes ERROR Jul 7, 2015

[Bioc-devel] mygene problems reported by the "Build/check report" for BioC 3.1

2 msgs Jul 6

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Dan Tenenbaum mygene problems reported by the "Build/check report" for BioC 3.1 Jul 6, 2015

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Dan Tenenbaum mygene problems reported by the "Build/check report" for BioC 3.1 Jul 6, 2015

[Bioc-devel] mygene problems reported by the "Build/check report" for BioC 3.1

1 msg Jul 6

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Dan Tenenbaum mygene problems reported by the "Build/check report" for BioC 3.1 Jul 6, 2015

[Bioc-devel] Bioc-devel Digest, Vol 136, Issue 3

1 msg Jul 3

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Riccardo Romoli Bioc-devel Digest, Vol 136, Issue 3 Jul 3, 2015

[Bioc-devel] SNPlocs.Hsapiens.dbSNP142.GRCh37

3 msgs Jul 2

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Hervé Pagès SNPlocs.Hsapiens.dbSNP142.GRCh37 Jul 1, 2015

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COMMO Frederic SNPlocs.Hsapiens.dbSNP142.GRCh37 Jul 2, 2015

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Hervé Pagès SNPlocs.Hsapiens.dbSNP142.GRCh37 Jul 2, 2015

[Bioc-devel] Flagme creating vignettes ERROR

1 msg Jul 2

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Riccardo Romoli Flagme creating vignettes ERROR Jul 2, 2015

[Bioc-devel] Bioconductor Newsletter - July 2015

1 msg Jul 1

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Valerie Obenchain Bioconductor Newsletter - July 2015 Jul 1, 2015