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Bioc-devel July 2015

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Thursday, July 30, 2015 10 emails
Dan Tenenbaum BioConductor Resources CHELSEA JU BioConductor Resources Dan Tenenbaum BiocStyle and R markdown Martin Morgan error using the DEXSeqDataSet function Dan Tenenbaum BiocStyle and R markdown Leonard Goldstein error using the DEXSeqDataSet function Alejandro Reyes error using the DEXSeqDataSet function Kasper Daniel Hansen BiocStyle and R markdown Jim Hester BiocStyle and R markdown Kasper Daniel Hansen BiocStyle and R markdown
Wednesday, July 29, 2015 11 emails
Thomas Girke BiocStyle and R markdown Kasper Daniel Hansen BiocStyle and R markdown Thomas Girke BiocStyle and R markdown Kasper Daniel Hansen BiocStyle and R markdown Kasper Daniel Hansen BiocStyle and R markdown Thomas Girke BiocStyle and R markdown Hervé Pagès Hunting for the subset generic definition? Leonard Goldstein error using the DEXSeqDataSet function Ryan Hunting for the subset generic definition? Hervé Pagès Hunting for the subset generic definition? Steve Lianoglou Hunting for the subset generic definition?
Friday, July 24, 2015 3 emails
Henrik Bengtsson Make codetoolsBioC available on GitHub? Jim Hester Make codetoolsBioC available on GitHub? Henrik Bengtsson Make codetoolsBioC available on GitHub?
Thursday, July 23, 2015 3 emails
Michael Love testing class and length of function args Martin Morgan testing class and length of function args Hervé Pagès testing class and length of function args
Wednesday, July 22, 2015 6 emails
Jim Hester testing class and length of function args Valerie Obenchain testing class and length of function args Jim Hester testing class and length of function args Michael Love testing class and length of function args Dan Tenenbaum changes to igraph break many Bioconductor packages (in release and devel) Glyn Bradley changes to igraph break many Bioconductor packages (in release and devel)
Tuesday, July 21, 2015 5 emails
Charles Determan OmicsMarkeR problems reported by the "Build/check report" for BioC 3.1 Dan Tenenbaum OmicsMarkeR problems reported by the "Build/check report" for BioC 3.1 Charles Determan OmicsMarkeR problems reported by the "Build/check report" for BioC 3.1 Dan Tenenbaum OmicsMarkeR problems reported by the "Build/check report" for BioC 3.1 Charles Determan OmicsMarkeR problems reported by the "Build/check report" for BioC 3.1
Monday, July 20, 2015 1 email
Ulrich Bodenhofer Bioc-devel Digest, Vol 136, Issue 20
Sunday, July 19, 2015 1 email
Dan Tenenbaum changes to igraph break many Bioconductor packages (in release and devel)
Friday, July 17, 2015 2 emails
Julian Gehring VariantAnnotation: verbose output of readVcf Julian Gehring ggbio: gridExtra 2.0.0 breaks import
Thursday, July 16, 2015 6 emails
Leonardo Collado Torres Memory issues with BiocParallel::SnowParam() Tengfei Yin ggbio: gridExtra 2.0.0 breaks import Dan Tenenbaum ggbio: gridExtra 2.0.0 breaks import Valerie Obenchain VariantAnnotation: verbose output of readVcf Julian Gehring VariantAnnotation: verbose output of readVcf Julian Gehring ggbio: gridExtra 2.0.0 breaks import
Wednesday, July 15, 2015 5 emails
Valerie Obenchain Memory issues with BiocParallel::SnowParam() Valerie Obenchain Memory issues with BiocParallel::SnowParam() Siddhartha Bagaria Bioconductor Git/GitHub Mirrors Jim Hester Bioconductor Git/GitHub Mirrors COMMO Frederic New package: rCGH
Tuesday, July 14, 2015 5 emails
Siddhartha Bagaria Bioconductor Git/GitHub Mirrors Leonardo Collado Torres Memory issues with BiocParallel::SnowParam() Leonardo Collado Torres Redirect workers output to STDERR, how to do so with current BiocParallel::SnowParam()? Valerie Obenchain Redirect workers output to STDERR, how to do so with current BiocParallel::SnowParam()? Leonardo Collado Torres Redirect workers output to STDERR, how to do so with current BiocParallel::SnowParam()?
Sunday, July 12, 2015 2 emails
Valerie Obenchain Memory issues with BiocParallel::SnowParam() Valerie Obenchain Memory issues with BiocParallel::SnowParam()
Friday, July 10, 2015 2 emails
Leonardo Collado Torres Memory issues with BiocParallel::SnowParam() Vincent Carey Memory issues with BiocParallel::SnowParam()
Thursday, July 9, 2015 1 email
Leonardo Collado Torres Memory issues with BiocParallel::SnowParam()
Wednesday, July 8, 2015 2 emails
Dan Tenenbaum Short URLs for packages? Matthew McCall Bug in frmaTools
Tuesday, July 7, 2015 9 emails
Vincent Carey Short URLs for packages? Dan Tenenbaum Short URLs for packages? Vincent Carey Short URLs for packages? Ryan Bug in frmaTools Ryan Bug in frmaTools Matthew McCall Bug in frmaTools Sean Davis csaw - suggestions Arne Müller csaw - suggestions Riccardo Romoli Flagme creating vignettes ERROR
Monday, July 6, 2015 5 emails
Dan Tenenbaum mygene problems reported by the "Build/check report" for BioC 3.1 Dan Tenenbaum mygene problems reported by the "Build/check report" for BioC 3.1 Ryan Bug in frmaTools Ryan Bug in frmaTools Dan Tenenbaum mygene problems reported by the "Build/check report" for BioC 3.1
Saturday, July 4, 2015 1 email
Riccardo Romoli Flagme creating vignettes ERROR
Friday, July 3, 2015 1 email
Riccardo Romoli Bioc-devel Digest, Vol 136, Issue 3
Thursday, July 2, 2015 4 emails
Dan Tenenbaum Flagme creating vignettes ERROR Hervé Pagès SNPlocs.Hsapiens.dbSNP142.GRCh37 COMMO Frederic SNPlocs.Hsapiens.dbSNP142.GRCh37 Riccardo Romoli Flagme creating vignettes ERROR
Wednesday, July 1, 2015 2 emails
Valerie Obenchain Bioconductor Newsletter - July 2015 Hervé Pagès SNPlocs.Hsapiens.dbSNP142.GRCh37